Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf17O88472 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf17O88472 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Tnfrsf17O88472 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfrsf17O88472 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfrsf17O88472 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfrsf17O88472 Gm12566-201ENSMUST00000121479 359 ntBASIC12.77□□□□□ -0.37
Tnfrsf17O88472 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.77□□□□□ -0.37
Tnfrsf17O88472 Gm6222-202ENSMUST00000182143 629 ntBASIC12.77□□□□□ -0.37
Tnfrsf17O88472 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.77□□□□□ -0.37
Tnfrsf17O88472 Gm8099-201ENSMUST00000200510 742 ntBASIC12.77□□□□□ -0.37
Tnfrsf17O88472 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.77□□□□□ -0.37
Tnfrsf17O88472 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfrsf17O88472 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfrsf17O88472 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfrsf17O88472 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfrsf17O88472 Gm24447-201ENSMUST00000083977 338 ntBASIC12.77□□□□□ -0.37
Tnfrsf17O88472 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfrsf17O88472 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Tnfrsf17O88472 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfrsf17O88472 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfrsf17O88472 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfrsf17O88472 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfrsf17O88472 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfrsf17O88472 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfrsf17O88472 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfrsf17O88472 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfrsf17O88472 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.77□□□□□ -0.37
Tnfrsf17O88472 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Tnfrsf17O88472 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Tnfrsf17O88472 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Gm37922-201ENSMUST00000195596 455 ntBASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 CT009718.3-201ENSMUST00000221116 367 ntBASIC12.76□□□□□ -0.37
Tnfrsf17O88472 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Gm10146-201ENSMUST00000072739 309 ntBASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Tnfrsf17O88472 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfrsf17O88472 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfrsf17O88472 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Tnfrsf17O88472 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfrsf17O88472 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfrsf17O88472 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfrsf17O88472 Gm11628-201ENSMUST00000117568 171 ntBASIC12.75□□□□□ -0.37
Tnfrsf17O88472 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.75□□□□□ -0.37
Tnfrsf17O88472 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.75□□□□□ -0.37
Tnfrsf17O88472 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Tnfrsf17O88472 Mospd4-201ENSMUST00000180618 576 ntBASIC12.75□□□□□ -0.37
Tnfrsf17O88472 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.75□□□□□ -0.37
Tnfrsf17O88472 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms