Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smarce1O54941 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarce1O54941 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC16.41■□□□□ 0.22
Smarce1O54941 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smarce1O54941 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarce1O54941 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Smarce1O54941 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarce1O54941 AC159196.2-201ENSMUST00000224082 1622 ntBASIC16.41■□□□□ 0.22
Smarce1O54941 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarce1O54941 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarce1O54941 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarce1O54941 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Smarce1O54941 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Smarce1O54941 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smarce1O54941 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarce1O54941 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarce1O54941 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarce1O54941 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarce1O54941 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarce1O54941 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarce1O54941 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarce1O54941 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC16.4■□□□□ 0.22
Smarce1O54941 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.4■□□□□ 0.22
Smarce1O54941 Mir6990-201ENSMUST00000183724 91 ntBASIC16.4■□□□□ 0.22
Smarce1O54941 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Smarce1O54941 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smarce1O54941 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarce1O54941 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarce1O54941 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarce1O54941 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Smarce1O54941 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Smarce1O54941 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smarce1O54941 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Smarce1O54941 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarce1O54941 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarce1O54941 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smarce1O54941 Gm45667-201ENSMUST00000210380 1316 ntBASIC16.4■□□□□ 0.22
Smarce1O54941 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarce1O54941 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Smarce1O54941 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Smarce1O54941 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Smarce1O54941 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Smarce1O54941 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarce1O54941 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarce1O54941 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarce1O54941 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarce1O54941 Gm8337-201ENSMUST00000187358 1938 ntBASIC16.39■□□□□ 0.21
Smarce1O54941 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarce1O54941 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smarce1O54941 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarce1O54941 AC155298.2-201ENSMUST00000225485 6226 ntBASIC16.39■□□□□ 0.21
Smarce1O54941 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC16.39■□□□□ 0.21
Smarce1O54941 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Smarce1O54941 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarce1O54941 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarce1O54941 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smarce1O54941 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarce1O54941 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Smarce1O54941 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Smarce1O54941 Gm25911-201ENSMUST00000157621 56 ntBASIC16.39■□□□□ 0.21
Smarce1O54941 Gm18766-201ENSMUST00000189811 808 ntBASIC16.39■□□□□ 0.21
Smarce1O54941 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smarce1O54941 Gm43125-201ENSMUST00000201724 730 ntBASIC16.39■□□□□ 0.21
Smarce1O54941 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.39■□□□□ 0.21
Smarce1O54941 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Smarce1O54941 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Smarce1O54941 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smarce1O54941 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Smarce1O54941 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smarce1O54941 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC16.39■□□□□ 0.21
Smarce1O54941 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Smarce1O54941 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smarce1O54941 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Smarce1O54941 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Smarce1O54941 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarce1O54941 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarce1O54941 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarce1O54941 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smarce1O54941 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Smarce1O54941 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smarce1O54941 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Smarce1O54941 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarce1O54941 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarce1O54941 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smarce1O54941 Gm44065-201ENSMUST00000203184 3527 ntBASIC16.38■□□□□ 0.21
Smarce1O54941 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarce1O54941 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarce1O54941 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.38■□□□□ 0.21
Smarce1O54941 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.38■□□□□ 0.21
Smarce1O54941 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.38■□□□□ 0.21
Smarce1O54941 Dupd1-202ENSMUST00000224735 548 ntBASIC16.38■□□□□ 0.21
Smarce1O54941 AC166997.1-201ENSMUST00000225122 572 ntBASIC16.38■□□□□ 0.21
Smarce1O54941 AC090659.2-201ENSMUST00000225378 1186 ntBASIC16.38■□□□□ 0.21
Smarce1O54941 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Smarce1O54941 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarce1O54941 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarce1O54941 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Smarce1O54941 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Smarce1O54941 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Smarce1O54941 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms