Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Dkk1O54908 Gm2541-201ENSMUST00000161209 711 ntBASIC12.62□□□□□ -0.39
Dkk1O54908 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Dkk1O54908 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Dkk1O54908 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Dkk1O54908 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Dkk1O54908 Gm9726-201ENSMUST00000180321 678 ntBASIC12.62□□□□□ -0.39
Dkk1O54908 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.62□□□□□ -0.39
Dkk1O54908 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Dkk1O54908 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Dkk1O54908 Gm44643-201ENSMUST00000208542 674 ntTSL 3 BASIC12.62□□□□□ -0.39
Dkk1O54908 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.62□□□□□ -0.39
Dkk1O54908 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC12.62□□□□□ -0.39
Dkk1O54908 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.62□□□□□ -0.39
Dkk1O54908 CT010480.2-201ENSMUST00000225424 737 ntBASIC12.62□□□□□ -0.39
Dkk1O54908 AC158142.3-201ENSMUST00000226230 675 ntBASIC12.62□□□□□ -0.39
Dkk1O54908 CT025618.1-201ENSMUST00000227409 1279 ntBASIC12.62□□□□□ -0.39
Dkk1O54908 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Dkk1O54908 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.62□□□□□ -0.39
Dkk1O54908 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Dkk1O54908 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Dkk1O54908 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.62□□□□□ -0.39
Dkk1O54908 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Dkk1O54908 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Dkk1O54908 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Dkk1O54908 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Dkk1O54908 Gm6655-201ENSMUST00000201932 1309 ntBASIC12.62□□□□□ -0.39
Dkk1O54908 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.62□□□□□ -0.39
Dkk1O54908 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Dkk1O54908 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Dkk1O54908 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Dkk1O54908 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Dkk1O54908 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Dkk1O54908 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Dkk1O54908 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Dkk1O54908 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Dkk1O54908 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Dkk1O54908 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.61□□□□□ -0.39
Dkk1O54908 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Dkk1O54908 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Dkk1O54908 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC12.61□□□□□ -0.39
Dkk1O54908 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Dkk1O54908 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.61□□□□□ -0.39
Dkk1O54908 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Dkk1O54908 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Dkk1O54908 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Dkk1O54908 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Dkk1O54908 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Dkk1O54908 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Dkk1O54908 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Dkk1O54908 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.61□□□□□ -0.39
Dkk1O54908 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.61□□□□□ -0.39
Dkk1O54908 Gm22195-201ENSMUST00000116861 108 ntBASIC12.61□□□□□ -0.39
Dkk1O54908 Gm11871-201ENSMUST00000122429 1061 ntBASIC12.61□□□□□ -0.39
Dkk1O54908 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.61□□□□□ -0.39
Dkk1O54908 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Dkk1O54908 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC12.61□□□□□ -0.39
Dkk1O54908 Gm27920-201ENSMUST00000183953 96 ntBASIC12.61□□□□□ -0.39
Dkk1O54908 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Dkk1O54908 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC12.61□□□□□ -0.39
Dkk1O54908 Gm37088-201ENSMUST00000193887 406 ntBASIC12.61□□□□□ -0.39
Dkk1O54908 Gm42509-201ENSMUST00000197390 781 ntBASIC12.61□□□□□ -0.39
Dkk1O54908 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.61□□□□□ -0.39
Dkk1O54908 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Dkk1O54908 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Dkk1O54908 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Dkk1O54908 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC12.61□□□□□ -0.39
Dkk1O54908 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.61□□□□□ -0.39
Dkk1O54908 AC164297.5-201ENSMUST00000224365 198 ntBASIC12.61□□□□□ -0.39
Dkk1O54908 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.61□□□□□ -0.39
Dkk1O54908 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Dkk1O54908 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.61□□□□□ -0.39
Dkk1O54908 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Dkk1O54908 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Dkk1O54908 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Dkk1O54908 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Dkk1O54908 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.61□□□□□ -0.39
Dkk1O54908 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Dkk1O54908 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Dkk1O54908 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Dkk1O54908 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Dkk1O54908 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Dkk1O54908 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Dkk1O54908 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Dkk1O54908 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Dkk1O54908 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Dkk1O54908 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Dkk1O54908 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Dkk1O54908 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Dkk1O54908 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Dkk1O54908 Gm45172-201ENSMUST00000206054 1301 ntBASIC12.61□□□□□ -0.39
Dkk1O54908 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Dkk1O54908 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Dkk1O54908 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Dkk1O54908 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Dkk1O54908 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Dkk1O54908 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.61□□□□□ -0.39
Dkk1O54908 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Dkk1O54908 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Dkk1O54908 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms