Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.21□□□□□ -0.13
Sdc4O35988 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.21□□□□□ -0.13
Sdc4O35988 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.21□□□□□ -0.13
Sdc4O35988 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.21□□□□□ -0.13
Sdc4O35988 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.21□□□□□ -0.13
Sdc4O35988 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.21□□□□□ -0.13
Sdc4O35988 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Sdc4O35988 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Sdc4O35988 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sdc4O35988 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Sdc4O35988 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sdc4O35988 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.21□□□□□ -0.14
Sdc4O35988 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Sdc4O35988 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sdc4O35988 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sdc4O35988 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Sdc4O35988 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sdc4O35988 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc4O35988 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc4O35988 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc4O35988 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Sdc4O35988 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc4O35988 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc4O35988 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc4O35988 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.2□□□□□ -0.14
Sdc4O35988 Gm26464-201ENSMUST00000157094 305 ntBASIC14.2□□□□□ -0.14
Sdc4O35988 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.2□□□□□ -0.14
Sdc4O35988 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14.2□□□□□ -0.14
Sdc4O35988 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.2□□□□□ -0.14
Sdc4O35988 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Sdc4O35988 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc4O35988 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc4O35988 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc4O35988 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc4O35988 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc4O35988 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.2□□□□□ -0.14
Sdc4O35988 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc4O35988 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc4O35988 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc4O35988 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc4O35988 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc4O35988 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc4O35988 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Sdc4O35988 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc4O35988 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Sdc4O35988 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Sdc4O35988 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc4O35988 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc4O35988 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc4O35988 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc4O35988 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc4O35988 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sdc4O35988 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc4O35988 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc4O35988 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc4O35988 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc4O35988 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc4O35988 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc4O35988 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Sdc4O35988 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc4O35988 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc4O35988 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc4O35988 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc4O35988 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Sdc4O35988 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc4O35988 Gm14127-201ENSMUST00000117906 678 ntBASIC14.19□□□□□ -0.14
Sdc4O35988 Gm15376-201ENSMUST00000122258 783 ntBASIC14.19□□□□□ -0.14
Sdc4O35988 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc4O35988 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.19□□□□□ -0.14
Sdc4O35988 Gm8602-201ENSMUST00000184045 607 ntBASIC14.19□□□□□ -0.14
Sdc4O35988 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc4O35988 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc4O35988 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc4O35988 Gm5356-201ENSMUST00000093326 615 ntBASIC14.19□□□□□ -0.14
Sdc4O35988 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc4O35988 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.19□□□□□ -0.14
Sdc4O35988 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc4O35988 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Sdc4O35988 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc4O35988 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc4O35988 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Sdc4O35988 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sdc4O35988 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.18□□□□□ -0.14
Sdc4O35988 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sdc4O35988 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sdc4O35988 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sdc4O35988 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sdc4O35988 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sdc4O35988 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Sdc4O35988 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sdc4O35988 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sdc4O35988 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sdc4O35988 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Sdc4O35988 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Sdc4O35988 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.18□□□□□ -0.14
Sdc4O35988 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Sdc4O35988 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.18□□□□□ -0.14
Sdc4O35988 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sdc4O35988 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.18□□□□□ -0.14
Sdc4O35988 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms