Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cx3cl1O35188 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cx3cl1O35188 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Cx3cl1O35188 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cx3cl1O35188 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Cx3cl1O35188 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cx3cl1O35188 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cx3cl1O35188 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cx3cl1O35188 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13□□□□□ -0.33
Cx3cl1O35188 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13□□□□□ -0.33
Cx3cl1O35188 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cx3cl1O35188 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cl1O35188 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cl1O35188 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cl1O35188 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cx3cl1O35188 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cx3cl1O35188 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cx3cl1O35188 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cx3cl1O35188 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cl1O35188 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cl1O35188 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cl1O35188 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cx3cl1O35188 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cl1O35188 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.99□□□□□ -0.33
Cx3cl1O35188 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cl1O35188 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cl1O35188 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cx3cl1O35188 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.99□□□□□ -0.33
Cx3cl1O35188 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.99□□□□□ -0.33
Cx3cl1O35188 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cx3cl1O35188 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cx3cl1O35188 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Cx3cl1O35188 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cx3cl1O35188 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cl1O35188 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cl1O35188 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cl1O35188 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cl1O35188 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cl1O35188 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cl1O35188 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Cx3cl1O35188 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cl1O35188 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cl1O35188 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cl1O35188 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cl1O35188 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cl1O35188 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cl1O35188 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cl1O35188 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cl1O35188 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cl1O35188 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cl1O35188 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cl1O35188 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cl1O35188 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cx3cl1O35188 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Cx3cl1O35188 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cx3cl1O35188 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cx3cl1O35188 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cx3cl1O35188 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cx3cl1O35188 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Cx3cl1O35188 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cx3cl1O35188 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Cx3cl1O35188 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Cx3cl1O35188 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cx3cl1O35188 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cx3cl1O35188 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cx3cl1O35188 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cx3cl1O35188 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cx3cl1O35188 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cx3cl1O35188 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cx3cl1O35188 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cx3cl1O35188 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cx3cl1O35188 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.98□□□□□ -0.33
Cx3cl1O35188 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.98□□□□□ -0.33
Cx3cl1O35188 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.98□□□□□ -0.33
Cx3cl1O35188 Gm16215-201ENSMUST00000161990 637 ntBASIC12.98□□□□□ -0.33
Cx3cl1O35188 Gm27437-201ENSMUST00000183429 107 ntBASIC12.98□□□□□ -0.33
Cx3cl1O35188 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.98□□□□□ -0.33
Cx3cl1O35188 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.98□□□□□ -0.33
Cx3cl1O35188 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.98□□□□□ -0.33
Cx3cl1O35188 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.98□□□□□ -0.33
Cx3cl1O35188 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cx3cl1O35188 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cx3cl1O35188 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Cx3cl1O35188 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cx3cl1O35188 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cx3cl1O35188 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cx3cl1O35188 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cx3cl1O35188 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cx3cl1O35188 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cx3cl1O35188 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Cx3cl1O35188 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.98□□□□□ -0.33
Cx3cl1O35188 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cx3cl1O35188 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cx3cl1O35188 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cx3cl1O35188 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cx3cl1O35188 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cx3cl1O35188 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cl1O35188 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cl1O35188 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cx3cl1O35188 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms