Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Polr1aO35134 Gm5641-202ENSMUST00000198699 1080 ntBASIC20.82■□□□□ 0.92
Polr1aO35134 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Polr1aO35134 Gm6458-201ENSMUST00000211573 635 ntBASIC20.82■□□□□ 0.92
Polr1aO35134 Gm7293-201ENSMUST00000216682 1007 ntBASIC20.82■□□□□ 0.92
Polr1aO35134 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Polr1aO35134 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Polr1aO35134 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Polr1aO35134 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Polr1aO35134 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Polr1aO35134 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Polr1aO35134 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Polr1aO35134 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Polr1aO35134 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
Polr1aO35134 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Polr1aO35134 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Polr1aO35134 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Polr1aO35134 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Polr1aO35134 Gm43068-201ENSMUST00000201095 1273 ntBASIC20.81■□□□□ 0.92
Polr1aO35134 Gm44772-201ENSMUST00000207623 1191 ntBASIC20.81■□□□□ 0.92
Polr1aO35134 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC20.81■□□□□ 0.92
Polr1aO35134 Gm30285-201ENSMUST00000214614 422 ntBASIC20.81■□□□□ 0.92
Polr1aO35134 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Polr1aO35134 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC20.81■□□□□ 0.92
Polr1aO35134 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Polr1aO35134 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Polr1aO35134 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC20.81■□□□□ 0.92
Polr1aO35134 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC20.81■□□□□ 0.92
Polr1aO35134 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Polr1aO35134 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Polr1aO35134 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Polr1aO35134 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Polr1aO35134 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC20.81■□□□□ 0.92
Polr1aO35134 Gm13316-201ENSMUST00000140537 691 ntBASIC20.81■□□□□ 0.92
Polr1aO35134 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Polr1aO35134 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Polr1aO35134 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Polr1aO35134 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Polr1aO35134 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Polr1aO35134 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Polr1aO35134 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Polr1aO35134 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC20.8■□□□□ 0.92
Polr1aO35134 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Polr1aO35134 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Polr1aO35134 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Polr1aO35134 Gm38297-201ENSMUST00000195122 1057 ntBASIC20.8■□□□□ 0.92
Polr1aO35134 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Polr1aO35134 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Polr1aO35134 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Polr1aO35134 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Polr1aO35134 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Polr1aO35134 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Polr1aO35134 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Polr1aO35134 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC20.79■□□□□ 0.92
Polr1aO35134 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Polr1aO35134 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC20.79■□□□□ 0.92
Polr1aO35134 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC20.79■□□□□ 0.92
Polr1aO35134 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC20.79■□□□□ 0.92
Polr1aO35134 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Polr1aO35134 Mir433-201ENSMUST00000093564 124 ntBASIC20.79■□□□□ 0.92
Polr1aO35134 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC20.79■□□□□ 0.92
Polr1aO35134 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC20.79■□□□□ 0.92
Polr1aO35134 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Polr1aO35134 AC113441.2-201ENSMUST00000221538 1468 ntBASIC20.79■□□□□ 0.92
Polr1aO35134 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Polr1aO35134 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Polr1aO35134 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Polr1aO35134 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Polr1aO35134 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Polr1aO35134 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Polr1aO35134 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Polr1aO35134 Gm43598-201ENSMUST00000202482 2479 ntBASIC20.79■□□□□ 0.92
Polr1aO35134 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC20.79■□□□□ 0.92
Polr1aO35134 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Polr1aO35134 Gm12997-201ENSMUST00000120207 640 ntBASIC20.78■□□□□ 0.92
Polr1aO35134 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC20.78■□□□□ 0.92
Polr1aO35134 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC20.78■□□□□ 0.92
Polr1aO35134 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Polr1aO35134 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Polr1aO35134 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Polr1aO35134 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Polr1aO35134 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Polr1aO35134 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC20.78■□□□□ 0.92
Polr1aO35134 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Polr1aO35134 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC20.78■□□□□ 0.92
Polr1aO35134 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Polr1aO35134 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Polr1aO35134 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Polr1aO35134 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Polr1aO35134 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC20.78■□□□□ 0.92
Polr1aO35134 Gm25214-201ENSMUST00000104573 129 ntBASIC20.78■□□□□ 0.92
Polr1aO35134 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Polr1aO35134 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Polr1aO35134 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Polr1aO35134 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Polr1aO35134 Gm5363-201ENSMUST00000211927 938 ntBASIC20.78■□□□□ 0.92
Polr1aO35134 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Polr1aO35134 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Polr1aO35134 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Polr1aO35134 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms