Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Gm25911-201ENSMUST00000157621 56 ntBASIC16.42■□□□□ 0.22
Hdac1O09106 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.42■□□□□ 0.22
Hdac1O09106 Gm27494-201ENSMUST00000184735 189 ntBASIC16.42■□□□□ 0.22
Hdac1O09106 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Hdac1O09106 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac1O09106 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac1O09106 Gm18934-201ENSMUST00000216671 1044 ntBASIC16.42■□□□□ 0.22
Hdac1O09106 AC166997.1-201ENSMUST00000225122 572 ntBASIC16.42■□□□□ 0.22
Hdac1O09106 AC154806.6-201ENSMUST00000228192 202 ntBASIC16.42■□□□□ 0.22
Hdac1O09106 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac1O09106 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac1O09106 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.42■□□□□ 0.22
Hdac1O09106 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Hdac1O09106 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac1O09106 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac1O09106 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Hdac1O09106 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac1O09106 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac1O09106 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac1O09106 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hdac1O09106 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac1O09106 Gm4782-201ENSMUST00000168705 2046 ntBASIC16.41■□□□□ 0.22
Hdac1O09106 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Hdac1O09106 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac1O09106 Gm15467-201ENSMUST00000120582 445 ntBASIC16.41■□□□□ 0.22
Hdac1O09106 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac1O09106 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac1O09106 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC16.41■□□□□ 0.22
Hdac1O09106 Gm9824-201ENSMUST00000178707 561 ntBASIC16.41■□□□□ 0.22
Hdac1O09106 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac1O09106 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac1O09106 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.41■□□□□ 0.22
Hdac1O09106 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac1O09106 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac1O09106 Gm10176-201ENSMUST00000159707 2264 ntBASIC16.41■□□□□ 0.22
Hdac1O09106 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac1O09106 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac1O09106 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac1O09106 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac1O09106 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac1O09106 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Hdac1O09106 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Hdac1O09106 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Hdac1O09106 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Hdac1O09106 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Hdac1O09106 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC16.41■□□□□ 0.22
Hdac1O09106 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac1O09106 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Hdac1O09106 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Hdac1O09106 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac1O09106 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac1O09106 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac1O09106 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac1O09106 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.4■□□□□ 0.22
Hdac1O09106 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Hdac1O09106 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac1O09106 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac1O09106 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Hdac1O09106 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac1O09106 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac1O09106 Gm14452-201ENSMUST00000118680 1632 ntBASIC16.4■□□□□ 0.22
Hdac1O09106 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac1O09106 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac1O09106 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC16.4■□□□□ 0.22
Hdac1O09106 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Hdac1O09106 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac1O09106 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac1O09106 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac1O09106 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac1O09106 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac1O09106 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Hdac1O09106 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Hdac1O09106 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Hdac1O09106 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC16.39■□□□□ 0.22
Hdac1O09106 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac1O09106 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac1O09106 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac1O09106 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac1O09106 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC16.39■□□□□ 0.21
Hdac1O09106 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac1O09106 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac1O09106 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac1O09106 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac1O09106 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac1O09106 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Hdac1O09106 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Hdac1O09106 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC16.39■□□□□ 0.21
Hdac1O09106 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac1O09106 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac1O09106 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac1O09106 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Hdac1O09106 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Hdac1O09106 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac1O09106 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac1O09106 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac1O09106 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac1O09106 Tmed9-203ENSMUST00000224741 1450 ntBASIC16.39■□□□□ 0.21
Hdac1O09106 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac1O09106 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Hdac1O09106 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms