Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ebf3O08791 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf3O08791 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf3O08791 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf3O08791 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ebf3O08791 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf3O08791 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.34□□□□□ -0.11
Ebf3O08791 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf3O08791 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ebf3O08791 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf3O08791 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf3O08791 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf3O08791 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.34□□□□□ -0.11
Ebf3O08791 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Ebf3O08791 Gm37714-201ENSMUST00000194742 342 ntBASIC14.34□□□□□ -0.11
Ebf3O08791 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.34□□□□□ -0.11
Ebf3O08791 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf3O08791 Gm5356-201ENSMUST00000093326 615 ntBASIC14.34□□□□□ -0.11
Ebf3O08791 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf3O08791 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf3O08791 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf3O08791 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf3O08791 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf3O08791 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf3O08791 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.34□□□□□ -0.11
Ebf3O08791 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf3O08791 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf3O08791 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf3O08791 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf3O08791 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Ebf3O08791 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ebf3O08791 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ebf3O08791 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Ebf3O08791 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.33□□□□□ -0.11
Ebf3O08791 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.33□□□□□ -0.11
Ebf3O08791 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.33□□□□□ -0.11
Ebf3O08791 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
Ebf3O08791 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.33□□□□□ -0.11
Ebf3O08791 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ebf3O08791 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ebf3O08791 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf3O08791 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf3O08791 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Ebf3O08791 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf3O08791 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.33□□□□□ -0.12
Ebf3O08791 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.33□□□□□ -0.12
Ebf3O08791 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.33□□□□□ -0.12
Ebf3O08791 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Ebf3O08791 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.33□□□□□ -0.12
Ebf3O08791 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf3O08791 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ebf3O08791 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf3O08791 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.33□□□□□ -0.12
Ebf3O08791 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Ebf3O08791 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf3O08791 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf3O08791 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Ebf3O08791 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf3O08791 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf3O08791 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf3O08791 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf3O08791 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.33□□□□□ -0.12
Ebf3O08791 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf3O08791 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf3O08791 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf3O08791 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf3O08791 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ebf3O08791 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf3O08791 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ebf3O08791 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Ebf3O08791 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.32□□□□□ -0.12
Ebf3O08791 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf3O08791 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf3O08791 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ebf3O08791 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ebf3O08791 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf3O08791 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf3O08791 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf3O08791 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.32□□□□□ -0.12
Ebf3O08791 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ebf3O08791 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ebf3O08791 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf3O08791 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf3O08791 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.32□□□□□ -0.12
Ebf3O08791 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ebf3O08791 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.32□□□□□ -0.12
Ebf3O08791 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf3O08791 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Ebf3O08791 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf3O08791 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf3O08791 Gm9899-201ENSMUST00000065519 555 ntBASIC14.32□□□□□ -0.12
Ebf3O08791 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf3O08791 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf3O08791 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ebf3O08791 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf3O08791 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf3O08791 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf3O08791 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Ebf3O08791 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ebf3O08791 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms