Protein–RNA interactions for Protein: L7N2C4

Gm4340, Predicted gene 4340, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4340L7N2C4 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm4340L7N2C4 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Gm4340L7N2C4 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm4340L7N2C4 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm4340L7N2C4 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm4340L7N2C4 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm4340L7N2C4 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Gm4340L7N2C4 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm4340L7N2C4 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Gm4340L7N2C4 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Gm4340L7N2C4 Gm13886-201ENSMUST00000117876 1183 ntBASIC16.42■□□□□ 0.22
Gm4340L7N2C4 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC16.42■□□□□ 0.22
Gm4340L7N2C4 Gm6152-201ENSMUST00000151704 340 ntBASIC16.42■□□□□ 0.22
Gm4340L7N2C4 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC16.42■□□□□ 0.22
Gm4340L7N2C4 Mir1982-201ENSMUST00000157368 74 ntBASIC16.42■□□□□ 0.22
Gm4340L7N2C4 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC16.42■□□□□ 0.22
Gm4340L7N2C4 Gm8835-201ENSMUST00000173096 1169 ntBASIC16.42■□□□□ 0.22
Gm4340L7N2C4 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm4340L7N2C4 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm4340L7N2C4 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm4340L7N2C4 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm4340L7N2C4 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Gm4340L7N2C4 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm4340L7N2C4 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm4340L7N2C4 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm4340L7N2C4 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm4340L7N2C4 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Gm4340L7N2C4 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm4340L7N2C4 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Gm4340L7N2C4 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Gm4340L7N2C4 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm4340L7N2C4 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Gm4340L7N2C4 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm4340L7N2C4 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm4340L7N2C4 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm4340L7N2C4 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm4340L7N2C4 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Gm4340L7N2C4 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm4340L7N2C4 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Gm4340L7N2C4 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm4340L7N2C4 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm4340L7N2C4 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Gm4340L7N2C4 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm4340L7N2C4 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Gm4340L7N2C4 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Gm4340L7N2C4 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Gm4340L7N2C4 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Gm4340L7N2C4 Gm8598-201ENSMUST00000221184 836 ntBASIC16.41■□□□□ 0.22
Gm4340L7N2C4 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC16.41■□□□□ 0.22
Gm4340L7N2C4 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm4340L7N2C4 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Gm4340L7N2C4 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm4340L7N2C4 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm4340L7N2C4 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Gm4340L7N2C4 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm4340L7N2C4 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Gm4340L7N2C4 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Gm4340L7N2C4 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Gm4340L7N2C4 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm4340L7N2C4 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm4340L7N2C4 Gm9755-201ENSMUST00000032981 1356 ntBASIC16.4■□□□□ 0.22
Gm4340L7N2C4 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Gm4340L7N2C4 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm4340L7N2C4 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm4340L7N2C4 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm4340L7N2C4 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm4340L7N2C4 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC16.4■□□□□ 0.22
Gm4340L7N2C4 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC16.4■□□□□ 0.22
Gm4340L7N2C4 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm4340L7N2C4 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC16.4■□□□□ 0.22
Gm4340L7N2C4 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC16.4■□□□□ 0.22
Gm4340L7N2C4 Itm2b-204ENSMUST00000228637 783 ntBASIC16.4■□□□□ 0.22
Gm4340L7N2C4 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm4340L7N2C4 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm4340L7N2C4 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm4340L7N2C4 Rn7sk-201ENSMUST00000083103 331 ntBASIC16.4■□□□□ 0.22
Gm4340L7N2C4 Gm26315-201ENSMUST00000083890 321 ntBASIC16.4■□□□□ 0.22
Gm4340L7N2C4 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gm4340L7N2C4 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gm4340L7N2C4 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm4340L7N2C4 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Gm4340L7N2C4 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm4340L7N2C4 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Gm4340L7N2C4 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gm4340L7N2C4 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm4340L7N2C4 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Gm4340L7N2C4 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm4340L7N2C4 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Gm4340L7N2C4 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm4340L7N2C4 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm4340L7N2C4 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm4340L7N2C4 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.39■□□□□ 0.21
Gm4340L7N2C4 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Gm4340L7N2C4 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Gm4340L7N2C4 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Gm4340L7N2C4 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC16.39■□□□□ 0.21
Gm4340L7N2C4 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Gm4340L7N2C4 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC16.39■□□□□ 0.21
Gm4340L7N2C4 Gm29649-201ENSMUST00000185649 419 ntBASIC16.39■□□□□ 0.21
Gm4340L7N2C4 Gm9124-201ENSMUST00000191789 1092 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms