Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm11236J3QMS7 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.36□□□□□ -0.11
Gm11236J3QMS7 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm11236J3QMS7 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm11236J3QMS7 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm11236J3QMS7 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm11236J3QMS7 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Gm11236J3QMS7 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC14.36□□□□□ -0.11
Gm11236J3QMS7 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.36□□□□□ -0.11
Gm11236J3QMS7 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.36□□□□□ -0.11
Gm11236J3QMS7 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm11236J3QMS7 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm11236J3QMS7 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.36□□□□□ -0.11
Gm11236J3QMS7 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm11236J3QMS7 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm11236J3QMS7 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm11236J3QMS7 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Gm11236J3QMS7 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm11236J3QMS7 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm11236J3QMS7 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm11236J3QMS7 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm11236J3QMS7 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm11236J3QMS7 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gm11236J3QMS7 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Gm11236J3QMS7 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Gm11236J3QMS7 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.36□□□□□ -0.11
Gm11236J3QMS7 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Gm11236J3QMS7 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.36□□□□□ -0.11
Gm11236J3QMS7 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Gm44974-201ENSMUST00000206387 1279 ntBASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.35□□□□□ -0.11
Gm11236J3QMS7 Gm42853-201ENSMUST00000201273 1387 ntBASIC14.34□□□□□ -0.11
Gm11236J3QMS7 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm11236J3QMS7 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm11236J3QMS7 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm11236J3QMS7 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm11236J3QMS7 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm11236J3QMS7 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm11236J3QMS7 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm11236J3QMS7 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm11236J3QMS7 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm11236J3QMS7 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm11236J3QMS7 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm11236J3QMS7 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm11236J3QMS7 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm11236J3QMS7 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm11236J3QMS7 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm11236J3QMS7 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm11236J3QMS7 Gm15198-201ENSMUST00000117283 177 ntBASIC14.34□□□□□ -0.11
Gm11236J3QMS7 Gm1335-201ENSMUST00000121653 386 ntBASIC14.34□□□□□ -0.11
Gm11236J3QMS7 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm11236J3QMS7 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gm11236J3QMS7 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gm11236J3QMS7 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.34□□□□□ -0.11
Gm11236J3QMS7 Gm27682-201ENSMUST00000183930 110 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms