Protein–RNA interactions for Protein: F8VQ70

Scaper, S phase cyclin A-associated protein in the ER, mousemouse

Known RBP Predictions only

Length 1,398 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ScaperF8VQ70 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ScaperF8VQ70 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ScaperF8VQ70 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
ScaperF8VQ70 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ScaperF8VQ70 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
ScaperF8VQ70 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ScaperF8VQ70 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ScaperF8VQ70 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ScaperF8VQ70 Gm38037-201ENSMUST00000192600 1624 ntBASIC17.48■□□□□ 0.39
ScaperF8VQ70 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC17.48■□□□□ 0.39
ScaperF8VQ70 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ScaperF8VQ70 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
ScaperF8VQ70 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC17.48■□□□□ 0.39
ScaperF8VQ70 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC17.48■□□□□ 0.39
ScaperF8VQ70 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ScaperF8VQ70 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ScaperF8VQ70 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC17.48■□□□□ 0.39
ScaperF8VQ70 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ScaperF8VQ70 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ScaperF8VQ70 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ScaperF8VQ70 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ScaperF8VQ70 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ScaperF8VQ70 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ScaperF8VQ70 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ScaperF8VQ70 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ScaperF8VQ70 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ScaperF8VQ70 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ScaperF8VQ70 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ScaperF8VQ70 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ScaperF8VQ70 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ScaperF8VQ70 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ScaperF8VQ70 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ScaperF8VQ70 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ScaperF8VQ70 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
ScaperF8VQ70 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ScaperF8VQ70 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ScaperF8VQ70 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ScaperF8VQ70 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ScaperF8VQ70 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ScaperF8VQ70 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC17.47■□□□□ 0.39
ScaperF8VQ70 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC17.47■□□□□ 0.39
ScaperF8VQ70 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC17.47■□□□□ 0.39
ScaperF8VQ70 Gm24644-201ENSMUST00000157114 139 ntBASIC17.47■□□□□ 0.39
ScaperF8VQ70 Gm2445-201ENSMUST00000182798 989 ntBASIC17.47■□□□□ 0.39
ScaperF8VQ70 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC17.47■□□□□ 0.39
ScaperF8VQ70 Gm5276-201ENSMUST00000196683 1047 ntBASIC17.47■□□□□ 0.39
ScaperF8VQ70 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ScaperF8VQ70 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ScaperF8VQ70 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ScaperF8VQ70 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ScaperF8VQ70 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ScaperF8VQ70 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ScaperF8VQ70 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ScaperF8VQ70 CT030684.3-201ENSMUST00000227308 2445 ntBASIC17.46■□□□□ 0.39
ScaperF8VQ70 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC17.46■□□□□ 0.39
ScaperF8VQ70 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ScaperF8VQ70 Gm10710-201ENSMUST00000047876 3971 ntBASIC17.46■□□□□ 0.39
ScaperF8VQ70 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ScaperF8VQ70 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ScaperF8VQ70 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ScaperF8VQ70 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ScaperF8VQ70 Gm9347-201ENSMUST00000211473 1607 ntBASIC17.46■□□□□ 0.39
ScaperF8VQ70 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC17.46■□□□□ 0.39
ScaperF8VQ70 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ScaperF8VQ70 Gm12384-201ENSMUST00000119228 919 ntBASIC17.46■□□□□ 0.39
ScaperF8VQ70 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC17.46■□□□□ 0.39
ScaperF8VQ70 Gm27243-201ENSMUST00000183964 521 ntBASIC17.46■□□□□ 0.39
ScaperF8VQ70 Gm18027-201ENSMUST00000218947 619 ntBASIC17.46■□□□□ 0.39
ScaperF8VQ70 CU024892.2-201ENSMUST00000224608 832 ntBASIC17.46■□□□□ 0.39
ScaperF8VQ70 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC17.46■□□□□ 0.39
ScaperF8VQ70 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ScaperF8VQ70 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ScaperF8VQ70 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC17.46■□□□□ 0.39
ScaperF8VQ70 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ScaperF8VQ70 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ScaperF8VQ70 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ScaperF8VQ70 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ScaperF8VQ70 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
ScaperF8VQ70 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ScaperF8VQ70 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC17.46■□□□□ 0.39
ScaperF8VQ70 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ScaperF8VQ70 Gm7553-201ENSMUST00000185805 1426 ntBASIC17.46■□□□□ 0.39
ScaperF8VQ70 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC17.46■□□□□ 0.38
ScaperF8VQ70 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
ScaperF8VQ70 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
ScaperF8VQ70 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ScaperF8VQ70 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
ScaperF8VQ70 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ScaperF8VQ70 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ScaperF8VQ70 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ScaperF8VQ70 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC17.45■□□□□ 0.38
ScaperF8VQ70 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ScaperF8VQ70 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC17.45■□□□□ 0.38
ScaperF8VQ70 Gm43094-201ENSMUST00000196549 921 ntBASIC17.45■□□□□ 0.38
ScaperF8VQ70 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ScaperF8VQ70 AC154276.1-201ENSMUST00000228874 1299 ntBASIC17.45■□□□□ 0.38
ScaperF8VQ70 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ScaperF8VQ70 Gm10012-201ENSMUST00000078252 192 ntBASIC17.45■□□□□ 0.38
ScaperF8VQ70 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ScaperF8VQ70 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms