Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh17E9PXF0 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh17E9PXF0 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Pcdh17E9PXF0 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh17E9PXF0 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.87□□□□□ -0.35
Pcdh17E9PXF0 Gm27701-201ENSMUST00000184498 110 ntBASIC12.87□□□□□ -0.35
Pcdh17E9PXF0 Mir7654-201ENSMUST00000185082 70 ntBASIC12.87□□□□□ -0.35
Pcdh17E9PXF0 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.87□□□□□ -0.35
Pcdh17E9PXF0 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh17E9PXF0 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh17E9PXF0 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh17E9PXF0 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Pcdh17E9PXF0 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh17E9PXF0 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh17E9PXF0 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh17E9PXF0 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.87□□□□□ -0.35
Pcdh17E9PXF0 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh17E9PXF0 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Pcdh17E9PXF0 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh17E9PXF0 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh17E9PXF0 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.87□□□□□ -0.35
Pcdh17E9PXF0 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh17E9PXF0 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh17E9PXF0 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh17E9PXF0 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh17E9PXF0 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh17E9PXF0 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Pcdh17E9PXF0 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh17E9PXF0 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh17E9PXF0 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Pcdh17E9PXF0 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh17E9PXF0 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh17E9PXF0 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh17E9PXF0 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh17E9PXF0 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Pcdh17E9PXF0 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh17E9PXF0 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh17E9PXF0 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh17E9PXF0 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh17E9PXF0 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh17E9PXF0 Gm15240-201ENSMUST00000118156 720 ntBASIC12.86□□□□□ -0.35
Pcdh17E9PXF0 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh17E9PXF0 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh17E9PXF0 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.86□□□□□ -0.35
Pcdh17E9PXF0 Gm8602-201ENSMUST00000184045 607 ntBASIC12.86□□□□□ -0.35
Pcdh17E9PXF0 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.86□□□□□ -0.35
Pcdh17E9PXF0 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.86□□□□□ -0.35
Pcdh17E9PXF0 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Pcdh17E9PXF0 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Pcdh17E9PXF0 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh17E9PXF0 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh17E9PXF0 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Pcdh17E9PXF0 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh17E9PXF0 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh17E9PXF0 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh17E9PXF0 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh17E9PXF0 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh17E9PXF0 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.86□□□□□ -0.35
Pcdh17E9PXF0 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh17E9PXF0 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Pcdh17E9PXF0 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh17E9PXF0 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Pcdh17E9PXF0 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Gm9002-201ENSMUST00000178437 499 ntBASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Gm28911-201ENSMUST00000188837 117 ntBASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Pcdh17E9PXF0 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms