Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gm28043E0CXC2 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.87□□□□□ -0.19
Gm28043E0CXC2 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.87□□□□□ -0.19
Gm28043E0CXC2 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.87□□□□□ -0.19
Gm28043E0CXC2 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Gm28043E0CXC2 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Gm28043E0CXC2 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gm28043E0CXC2 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gm28043E0CXC2 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gm28043E0CXC2 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Gm28043E0CXC2 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Gm28043E0CXC2 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Gm28043E0CXC2 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.87□□□□□ -0.19
Gm28043E0CXC2 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.87□□□□□ -0.19
Gm28043E0CXC2 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.87□□□□□ -0.19
Gm28043E0CXC2 Gm43474-201ENSMUST00000196415 774 ntBASIC13.87□□□□□ -0.19
Gm28043E0CXC2 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.87□□□□□ -0.19
Gm28043E0CXC2 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.87□□□□□ -0.19
Gm28043E0CXC2 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Gm28043E0CXC2 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Gm28043E0CXC2 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Gm28043E0CXC2 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gm28043E0CXC2 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gm28043E0CXC2 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gm28043E0CXC2 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gm28043E0CXC2 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.87□□□□□ -0.19
Gm28043E0CXC2 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Gm28043E0CXC2 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Gm28043E0CXC2 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gm28043E0CXC2 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Gm28043E0CXC2 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.87□□□□□ -0.19
Gm28043E0CXC2 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.87□□□□□ -0.19
Gm28043E0CXC2 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Gm28043E0CXC2 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Gm28043E0CXC2 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.86□□□□□ -0.19
Gm28043E0CXC2 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gm28043E0CXC2 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gm28043E0CXC2 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gm28043E0CXC2 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gm28043E0CXC2 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Gm28043E0CXC2 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Gm28043E0CXC2 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Gm28043E0CXC2 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gm28043E0CXC2 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.86□□□□□ -0.19
Gm28043E0CXC2 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gm28043E0CXC2 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Gm28043E0CXC2 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
Gm28043E0CXC2 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.86□□□□□ -0.19
Gm28043E0CXC2 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gm28043E0CXC2 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gm28043E0CXC2 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Gm28043E0CXC2 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.86□□□□□ -0.19
Gm28043E0CXC2 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Gm28043E0CXC2 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gm28043E0CXC2 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gm28043E0CXC2 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gm28043E0CXC2 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gm28043E0CXC2 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gm28043E0CXC2 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.86□□□□□ -0.19
Gm28043E0CXC2 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.86□□□□□ -0.19
Gm28043E0CXC2 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gm28043E0CXC2 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Gm28043E0CXC2 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gm28043E0CXC2 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Gm22065-201ENSMUST00000103753 110 ntBASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Gm22066-201ENSMUST00000103761 110 ntBASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Gm24932-201ENSMUST00000103763 110 ntBASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Gm24115-201ENSMUST00000103799 110 ntBASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Gm22190-201ENSMUST00000103827 110 ntBASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Gm22191-201ENSMUST00000103831 110 ntBASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Gm24721-201ENSMUST00000103849 110 ntBASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Gm28018-201ENSMUST00000103869 110 ntBASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Gm26399-201ENSMUST00000103937 110 ntBASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Gm28043E0CXC2 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Gm25349-201ENSMUST00000177728 110 ntBASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Gm23616-201ENSMUST00000177797 110 ntBASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Gm25871-201ENSMUST00000177816 110 ntBASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Gm24752-201ENSMUST00000178240 110 ntBASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Gm24496-201ENSMUST00000178287 110 ntBASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Gm25649-201ENSMUST00000178476 110 ntBASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Gm25548-201ENSMUST00000178681 110 ntBASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Gm23147-201ENSMUST00000178841 110 ntBASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Gm26095-201ENSMUST00000179270 110 ntBASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Gm22171-201ENSMUST00000179283 110 ntBASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Gm23936-201ENSMUST00000179354 110 ntBASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Gm22619-201ENSMUST00000179516 110 ntBASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Gm25255-201ENSMUST00000179579 110 ntBASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Gm24755-201ENSMUST00000179691 110 ntBASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Gm26506-201ENSMUST00000179692 110 ntBASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Gm25086-201ENSMUST00000179931 110 ntBASIC13.85□□□□□ -0.19
Gm28043E0CXC2 Gm23243-201ENSMUST00000180047 110 ntBASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms