Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Gm12882-201ENSMUST00000121696 517 ntBASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Gm6376-201ENSMUST00000209407 580 ntBASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Gm18669-201ENSMUST00000216049 778 ntBASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Gm12887B1AVM1 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Gm6184-201ENSMUST00000120403 1261 ntBASIC11.15□□□□□ -0.62
Gm12887B1AVM1 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Gm27300-201ENSMUST00000184085 97 ntBASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Gm27335-201ENSMUST00000184758 97 ntBASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Gm7977-201ENSMUST00000193787 748 ntBASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Gm42670-201ENSMUST00000201816 1292 ntBASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Gm12887B1AVM1 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms