Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tubb1A2AQ07 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubb1A2AQ07 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.15□□□□□ -0.14
Tubb1A2AQ07 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubb1A2AQ07 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubb1A2AQ07 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tubb1A2AQ07 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Tubb1A2AQ07 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Tubb1A2AQ07 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb1A2AQ07 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb1A2AQ07 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb1A2AQ07 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb1A2AQ07 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb1A2AQ07 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb1A2AQ07 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.14□□□□□ -0.15
Tubb1A2AQ07 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb1A2AQ07 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Tubb1A2AQ07 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb1A2AQ07 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb1A2AQ07 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb1A2AQ07 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb1A2AQ07 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb1A2AQ07 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb1A2AQ07 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Tubb1A2AQ07 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb1A2AQ07 Gm14701-201ENSMUST00000117156 348 ntBASIC14.14□□□□□ -0.15
Tubb1A2AQ07 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.14□□□□□ -0.15
Tubb1A2AQ07 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.14□□□□□ -0.15
Tubb1A2AQ07 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.14□□□□□ -0.15
Tubb1A2AQ07 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Tubb1A2AQ07 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.14□□□□□ -0.15
Tubb1A2AQ07 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb1A2AQ07 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb1A2AQ07 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb1A2AQ07 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb1A2AQ07 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb1A2AQ07 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.14□□□□□ -0.15
Tubb1A2AQ07 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb1A2AQ07 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb1A2AQ07 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb1A2AQ07 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb1A2AQ07 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb1A2AQ07 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb1A2AQ07 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tubb1A2AQ07 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
Tubb1A2AQ07 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tubb1A2AQ07 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tubb1A2AQ07 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.13□□□□□ -0.15
Tubb1A2AQ07 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tubb1A2AQ07 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tubb1A2AQ07 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Tubb1A2AQ07 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Tubb1A2AQ07 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tubb1A2AQ07 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tubb1A2AQ07 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tubb1A2AQ07 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tubb1A2AQ07 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tubb1A2AQ07 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tubb1A2AQ07 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.13□□□□□ -0.15
Tubb1A2AQ07 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Tubb1A2AQ07 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tubb1A2AQ07 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.13□□□□□ -0.15
Tubb1A2AQ07 Gm8927-201ENSMUST00000181978 981 ntBASIC14.13□□□□□ -0.15
Tubb1A2AQ07 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Tubb1A2AQ07 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tubb1A2AQ07 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tubb1A2AQ07 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tubb1A2AQ07 Gm3222-201ENSMUST00000071282 990 ntBASIC14.13□□□□□ -0.15
Tubb1A2AQ07 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tubb1A2AQ07 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tubb1A2AQ07 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tubb1A2AQ07 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.13□□□□□ -0.15
Tubb1A2AQ07 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tubb1A2AQ07 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tubb1A2AQ07 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tubb1A2AQ07 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.13□□□□□ -0.15
Tubb1A2AQ07 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tubb1A2AQ07 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tubb1A2AQ07 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tubb1A2AQ07 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tubb1A2AQ07 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tubb1A2AQ07 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tubb1A2AQ07 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Tubb1A2AQ07 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tubb1A2AQ07 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tubb1A2AQ07 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Tubb1A2AQ07 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tubb1A2AQ07 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tubb1A2AQ07 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tubb1A2AQ07 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tubb1A2AQ07 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tubb1A2AQ07 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tubb1A2AQ07 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tubb1A2AQ07 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Tubb1A2AQ07 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tubb1A2AQ07 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tubb1A2AQ07 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tubb1A2AQ07 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tubb1A2AQ07 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tubb1A2AQ07 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms