Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav12d-1A0N8R0 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trav12d-1A0N8R0 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Gm6539-201ENSMUST00000119157 1064 ntBASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Gm6443-201ENSMUST00000203599 874 ntBASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 AC090659.1-201ENSMUST00000224334 768 ntBASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 AC131586.3-201ENSMUST00000228355 1367 ntBASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav12d-1A0N8R0 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 AC114543.1-201ENSMUST00000226451 1558 ntBASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Gm37714-201ENSMUST00000194742 342 ntBASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Gm45453-201ENSMUST00000211758 853 ntBASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav12d-1A0N8R0 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms