Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc112A0AUP1 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc112A0AUP1 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc112A0AUP1 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc112A0AUP1 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc112A0AUP1 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ccdc112A0AUP1 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ccdc112A0AUP1 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ccdc112A0AUP1 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC15.77■□□□□ 0.12
Ccdc112A0AUP1 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ccdc112A0AUP1 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ccdc112A0AUP1 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ccdc112A0AUP1 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC15.77■□□□□ 0.12
Ccdc112A0AUP1 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ccdc112A0AUP1 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ccdc112A0AUP1 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Ccdc112A0AUP1 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ccdc112A0AUP1 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC15.77■□□□□ 0.12
Ccdc112A0AUP1 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC15.77■□□□□ 0.12
Ccdc112A0AUP1 Gm12428-201ENSMUST00000119844 727 ntBASIC15.77■□□□□ 0.12
Ccdc112A0AUP1 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ccdc112A0AUP1 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Ccdc112A0AUP1 Gm44335-201ENSMUST00000196879 141 ntBASIC15.77■□□□□ 0.12
Ccdc112A0AUP1 Gm44297-201ENSMUST00000198304 141 ntBASIC15.77■□□□□ 0.12
Ccdc112A0AUP1 Gm44346-201ENSMUST00000198851 141 ntBASIC15.77■□□□□ 0.12
Ccdc112A0AUP1 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.77■□□□□ 0.12
Ccdc112A0AUP1 Gm6916-202ENSMUST00000205523 195 ntBASIC15.77■□□□□ 0.12
Ccdc112A0AUP1 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Ccdc112A0AUP1 Gm18041-201ENSMUST00000218210 618 ntBASIC15.77■□□□□ 0.12
Ccdc112A0AUP1 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ccdc112A0AUP1 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ccdc112A0AUP1 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ccdc112A0AUP1 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Ccdc112A0AUP1 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ccdc112A0AUP1 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ccdc112A0AUP1 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ccdc112A0AUP1 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ccdc112A0AUP1 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Ccdc112A0AUP1 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Ccdc112A0AUP1 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15.77■□□□□ 0.11
Ccdc112A0AUP1 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ccdc112A0AUP1 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ccdc112A0AUP1 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC15.77■□□□□ 0.11
Ccdc112A0AUP1 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
Ccdc112A0AUP1 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ccdc112A0AUP1 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Gm22065-201ENSMUST00000103753 110 ntBASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Gm22066-201ENSMUST00000103761 110 ntBASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Gm24932-201ENSMUST00000103763 110 ntBASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Gm24115-201ENSMUST00000103799 110 ntBASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Gm22190-201ENSMUST00000103827 110 ntBASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Gm22191-201ENSMUST00000103831 110 ntBASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Gm24721-201ENSMUST00000103849 110 ntBASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Gm28018-201ENSMUST00000103869 110 ntBASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Gm26399-201ENSMUST00000103937 110 ntBASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Gm25349-201ENSMUST00000177728 110 ntBASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Gm23616-201ENSMUST00000177797 110 ntBASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Gm25871-201ENSMUST00000177816 110 ntBASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Gm24752-201ENSMUST00000178240 110 ntBASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Gm24496-201ENSMUST00000178287 110 ntBASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Gm25649-201ENSMUST00000178476 110 ntBASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Gm25548-201ENSMUST00000178681 110 ntBASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Gm23147-201ENSMUST00000178841 110 ntBASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Gm26095-201ENSMUST00000179270 110 ntBASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Gm22171-201ENSMUST00000179283 110 ntBASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Gm23936-201ENSMUST00000179354 110 ntBASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Gm22619-201ENSMUST00000179516 110 ntBASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Gm25255-201ENSMUST00000179579 110 ntBASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Gm24755-201ENSMUST00000179691 110 ntBASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Gm26506-201ENSMUST00000179692 110 ntBASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Gm25086-201ENSMUST00000179931 110 ntBASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Gm23243-201ENSMUST00000180047 110 ntBASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Gm24659-201ENSMUST00000180212 110 ntBASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Gm24169-201ENSMUST00000180244 110 ntBASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Gm23689-201ENSMUST00000180354 110 ntBASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Gm27359-201ENSMUST00000184153 110 ntBASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Gm27785-201ENSMUST00000184268 110 ntBASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Gm27466-201ENSMUST00000184396 110 ntBASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Gm27703-201ENSMUST00000184836 110 ntBASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Gm43474-201ENSMUST00000196415 774 ntBASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ccdc112A0AUP1 AC121804.3-201ENSMUST00000223420 295 ntBASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms