Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc194A0A140LIT1 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc194A0A140LIT1 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc194A0A140LIT1 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Ccdc194A0A140LIT1 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc194A0A140LIT1 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.74□□□□□ -0.21
Ccdc194A0A140LIT1 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc194A0A140LIT1 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.74□□□□□ -0.21
Ccdc194A0A140LIT1 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc194A0A140LIT1 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc194A0A140LIT1 Gm4995-201ENSMUST00000117247 432 ntBASIC13.74□□□□□ -0.21
Ccdc194A0A140LIT1 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.74□□□□□ -0.21
Ccdc194A0A140LIT1 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc194A0A140LIT1 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.74□□□□□ -0.21
Ccdc194A0A140LIT1 Gm18766-201ENSMUST00000189811 808 ntBASIC13.74□□□□□ -0.21
Ccdc194A0A140LIT1 Gm37714-201ENSMUST00000194742 342 ntBASIC13.74□□□□□ -0.21
Ccdc194A0A140LIT1 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.74□□□□□ -0.21
Ccdc194A0A140LIT1 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc194A0A140LIT1 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc194A0A140LIT1 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.74□□□□□ -0.21
Ccdc194A0A140LIT1 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.74□□□□□ -0.21
Ccdc194A0A140LIT1 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc194A0A140LIT1 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Ccdc194A0A140LIT1 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc194A0A140LIT1 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Ccdc194A0A140LIT1 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc194A0A140LIT1 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc194A0A140LIT1 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.74□□□□□ -0.21
Ccdc194A0A140LIT1 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Ccdc194A0A140LIT1 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ccdc194A0A140LIT1 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Ccdc194A0A140LIT1 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 Gm24513-201ENSMUST00000174964 138 ntBASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 Gm27397-201ENSMUST00000184997 107 ntBASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 Gm43474-201ENSMUST00000196415 774 ntBASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 Gm2213-201ENSMUST00000197485 688 ntBASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ccdc194A0A140LIT1 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc194A0A140LIT1 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Ccdc194A0A140LIT1 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.72□□□□□ -0.21
Ccdc194A0A140LIT1 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc194A0A140LIT1 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Ccdc194A0A140LIT1 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc194A0A140LIT1 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc194A0A140LIT1 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc194A0A140LIT1 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc194A0A140LIT1 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc194A0A140LIT1 Gm22065-201ENSMUST00000103753 110 ntBASIC13.72□□□□□ -0.21
Ccdc194A0A140LIT1 Gm22066-201ENSMUST00000103761 110 ntBASIC13.72□□□□□ -0.21
Ccdc194A0A140LIT1 Gm24932-201ENSMUST00000103763 110 ntBASIC13.72□□□□□ -0.21
Ccdc194A0A140LIT1 Gm24115-201ENSMUST00000103799 110 ntBASIC13.72□□□□□ -0.21
Ccdc194A0A140LIT1 Gm22190-201ENSMUST00000103827 110 ntBASIC13.72□□□□□ -0.21
Ccdc194A0A140LIT1 Gm22191-201ENSMUST00000103831 110 ntBASIC13.72□□□□□ -0.21
Ccdc194A0A140LIT1 Gm24721-201ENSMUST00000103849 110 ntBASIC13.72□□□□□ -0.21
Ccdc194A0A140LIT1 Gm28018-201ENSMUST00000103869 110 ntBASIC13.72□□□□□ -0.21
Ccdc194A0A140LIT1 Gm26399-201ENSMUST00000103937 110 ntBASIC13.72□□□□□ -0.21
Ccdc194A0A140LIT1 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc194A0A140LIT1 Gm11594-201ENSMUST00000122313 162 ntBASIC13.72□□□□□ -0.21
Ccdc194A0A140LIT1 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.72□□□□□ -0.21
Ccdc194A0A140LIT1 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ccdc194A0A140LIT1 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.72□□□□□ -0.21
Ccdc194A0A140LIT1 Gm25349-201ENSMUST00000177728 110 ntBASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 157.8 ms