Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 Gm4913-201ENSMUST00000117075 1290 ntBASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 AC132104.2-201ENSMUST00000215011 266 ntBASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Trav6n-6A0A075B6B2 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 Gm13597-201ENSMUST00000121239 375 ntBASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Trav6n-6A0A075B6B2 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Trav6n-6A0A075B6B2 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms