Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav18A0A075B656 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav18A0A075B656 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav18A0A075B656 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav18A0A075B656 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav18A0A075B656 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav18A0A075B656 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav18A0A075B656 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav18A0A075B656 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav18A0A075B656 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Trav18A0A075B656 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav18A0A075B656 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav18A0A075B656 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav18A0A075B656 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav18A0A075B656 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav18A0A075B656 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav18A0A075B656 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav18A0A075B656 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav18A0A075B656 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav18A0A075B656 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav18A0A075B656 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav18A0A075B656 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.32□□□□□ -0.6
Trav18A0A075B656 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav18A0A075B656 Gm43125-201ENSMUST00000201724 730 ntBASIC11.32□□□□□ -0.6
Trav18A0A075B656 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC11.32□□□□□ -0.6
Trav18A0A075B656 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav18A0A075B656 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trav18A0A075B656 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC11.32□□□□□ -0.6
Trav18A0A075B656 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav18A0A075B656 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav18A0A075B656 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav18A0A075B656 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav18A0A075B656 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav18A0A075B656 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav18A0A075B656 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav18A0A075B656 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Trav18A0A075B656 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav18A0A075B656 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trav18A0A075B656 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav18A0A075B656 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav18A0A075B656 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav18A0A075B656 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav18A0A075B656 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav18A0A075B656 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav18A0A075B656 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav18A0A075B656 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav18A0A075B656 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav18A0A075B656 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trav18A0A075B656 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav18A0A075B656 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav18A0A075B656 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav18A0A075B656 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav18A0A075B656 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav18A0A075B656 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav18A0A075B656 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav18A0A075B656 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav18A0A075B656 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav18A0A075B656 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav18A0A075B656 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav18A0A075B656 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav18A0A075B656 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC11.31□□□□□ -0.6
Trav18A0A075B656 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav18A0A075B656 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav18A0A075B656 Gm29741-201ENSMUST00000192667 421 ntBASIC11.31□□□□□ -0.6
Trav18A0A075B656 Gm43073-201ENSMUST00000198200 1189 ntBASIC11.31□□□□□ -0.6
Trav18A0A075B656 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav18A0A075B656 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav18A0A075B656 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.31□□□□□ -0.6
Trav18A0A075B656 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav18A0A075B656 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav18A0A075B656 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Trav18A0A075B656 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav18A0A075B656 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav18A0A075B656 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav18A0A075B656 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav18A0A075B656 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav18A0A075B656 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav18A0A075B656 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav18A0A075B656 Gm45667-201ENSMUST00000210380 1316 ntBASIC11.31□□□□□ -0.6
Trav18A0A075B656 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav18A0A075B656 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.31□□□□□ -0.6
Trav18A0A075B656 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav18A0A075B656 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms