Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Speer3W4VSP1 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.17□□□□□ -0.14
Speer3W4VSP1 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Speer3W4VSP1 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Speer3W4VSP1 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Speer3W4VSP1 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Speer3W4VSP1 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Speer3W4VSP1 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Speer3W4VSP1 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Speer3W4VSP1 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Speer3W4VSP1 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Speer3W4VSP1 Gm8749-201ENSMUST00000117737 331 ntBASIC14.17□□□□□ -0.14
Speer3W4VSP1 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.17□□□□□ -0.14
Speer3W4VSP1 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Speer3W4VSP1 Gm18737-201ENSMUST00000173594 937 ntBASIC14.17□□□□□ -0.14
Speer3W4VSP1 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Speer3W4VSP1 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC14.17□□□□□ -0.14
Speer3W4VSP1 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC14.17□□□□□ -0.14
Speer3W4VSP1 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.17□□□□□ -0.14
Speer3W4VSP1 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.17□□□□□ -0.14
Speer3W4VSP1 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Speer3W4VSP1 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Speer3W4VSP1 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Speer3W4VSP1 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Speer3W4VSP1 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Speer3W4VSP1 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Speer3W4VSP1 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Speer3W4VSP1 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Speer3W4VSP1 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Speer3W4VSP1 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Speer3W4VSP1 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Speer3W4VSP1 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Speer3W4VSP1 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Speer3W4VSP1 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Speer3W4VSP1 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Speer3W4VSP1 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Speer3W4VSP1 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Speer3W4VSP1 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Speer3W4VSP1 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Speer3W4VSP1 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC14.17□□□□□ -0.14
Speer3W4VSP1 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Speer3W4VSP1 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Speer3W4VSP1 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Speer3W4VSP1 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Speer3W4VSP1 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Speer3W4VSP1 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Speer3W4VSP1 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Speer3W4VSP1 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Speer3W4VSP1 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Speer3W4VSP1 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.16□□□□□ -0.14
Speer3W4VSP1 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Speer3W4VSP1 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.16□□□□□ -0.14
Speer3W4VSP1 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Speer3W4VSP1 Rprl2-201ENSMUST00000157150 290 ntBASIC14.16□□□□□ -0.14
Speer3W4VSP1 Rpph1-201ENSMUST00000175096 319 ntBASIC14.16□□□□□ -0.14
Speer3W4VSP1 Gm45098-201ENSMUST00000207179 657 ntBASIC14.16□□□□□ -0.14
Speer3W4VSP1 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Speer3W4VSP1 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Speer3W4VSP1 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Speer3W4VSP1 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Speer3W4VSP1 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Speer3W4VSP1 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.16□□□□□ -0.14
Speer3W4VSP1 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Speer3W4VSP1 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Speer3W4VSP1 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.16□□□□□ -0.14
Speer3W4VSP1 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Speer3W4VSP1 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.16□□□□□ -0.14
Speer3W4VSP1 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Speer3W4VSP1 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Speer3W4VSP1 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Speer3W4VSP1 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Speer3W4VSP1 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.15□□□□□ -0.14
Speer3W4VSP1 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Speer3W4VSP1 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Speer3W4VSP1 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Speer3W4VSP1 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Speer3W4VSP1 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Speer3W4VSP1 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Speer3W4VSP1 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Speer3W4VSP1 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Speer3W4VSP1 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Speer3W4VSP1 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.15□□□□□ -0.14
Speer3W4VSP1 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Speer3W4VSP1 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Speer3W4VSP1 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Speer3W4VSP1 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Speer3W4VSP1 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.15□□□□□ -0.14
Speer3W4VSP1 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.15□□□□□ -0.14
Speer3W4VSP1 Gm27397-201ENSMUST00000184997 107 ntBASIC14.15□□□□□ -0.14
Speer3W4VSP1 Gm2451-201ENSMUST00000199447 999 ntBASIC14.15□□□□□ -0.14
Speer3W4VSP1 Gm10290-201ENSMUST00000200451 999 ntBASIC14.15□□□□□ -0.14
Speer3W4VSP1 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.15□□□□□ -0.14
Speer3W4VSP1 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.15□□□□□ -0.14
Speer3W4VSP1 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC14.15□□□□□ -0.14
Speer3W4VSP1 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Speer3W4VSP1 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Speer3W4VSP1 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Speer3W4VSP1 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Speer3W4VSP1 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Speer3W4VSP1 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms