Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
H2afb3S4R1G7 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
H2afb3S4R1G7 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.46□□□□□ -0.42
H2afb3S4R1G7 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
H2afb3S4R1G7 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
H2afb3S4R1G7 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
H2afb3S4R1G7 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
H2afb3S4R1G7 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
H2afb3S4R1G7 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
H2afb3S4R1G7 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
H2afb3S4R1G7 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.46□□□□□ -0.42
H2afb3S4R1G7 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
H2afb3S4R1G7 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
H2afb3S4R1G7 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
H2afb3S4R1G7 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb3S4R1G7 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
H2afb3S4R1G7 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb3S4R1G7 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb3S4R1G7 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb3S4R1G7 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
H2afb3S4R1G7 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
H2afb3S4R1G7 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
H2afb3S4R1G7 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
H2afb3S4R1G7 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
H2afb3S4R1G7 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb3S4R1G7 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb3S4R1G7 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb3S4R1G7 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb3S4R1G7 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb3S4R1G7 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb3S4R1G7 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb3S4R1G7 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb3S4R1G7 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.45□□□□□ -0.42
H2afb3S4R1G7 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.45□□□□□ -0.42
H2afb3S4R1G7 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb3S4R1G7 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.45□□□□□ -0.42
H2afb3S4R1G7 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.45□□□□□ -0.42
H2afb3S4R1G7 Gm18889-201ENSMUST00000174284 929 ntBASIC12.45□□□□□ -0.42
H2afb3S4R1G7 Gm9824-201ENSMUST00000178707 561 ntBASIC12.45□□□□□ -0.42
H2afb3S4R1G7 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb3S4R1G7 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb3S4R1G7 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb3S4R1G7 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
H2afb3S4R1G7 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb3S4R1G7 BC001981-202ENSMUST00000191393 1545 ntBASIC12.45□□□□□ -0.42
H2afb3S4R1G7 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
H2afb3S4R1G7 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.45□□□□□ -0.42
H2afb3S4R1G7 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb3S4R1G7 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb3S4R1G7 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb3S4R1G7 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb3S4R1G7 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb3S4R1G7 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
H2afb3S4R1G7 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.45□□□□□ -0.42
H2afb3S4R1G7 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
H2afb3S4R1G7 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.44□□□□□ -0.42
H2afb3S4R1G7 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
H2afb3S4R1G7 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb3S4R1G7 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb3S4R1G7 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb3S4R1G7 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb3S4R1G7 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
H2afb3S4R1G7 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb3S4R1G7 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb3S4R1G7 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
H2afb3S4R1G7 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb3S4R1G7 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb3S4R1G7 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb3S4R1G7 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb3S4R1G7 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb3S4R1G7 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb3S4R1G7 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb3S4R1G7 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
H2afb3S4R1G7 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb3S4R1G7 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb3S4R1G7 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.44□□□□□ -0.42
H2afb3S4R1G7 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.44□□□□□ -0.42
H2afb3S4R1G7 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
H2afb3S4R1G7 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
H2afb3S4R1G7 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb3S4R1G7 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb3S4R1G7 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb3S4R1G7 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb3S4R1G7 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.44□□□□□ -0.42
H2afb3S4R1G7 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb3S4R1G7 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb3S4R1G7 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb3S4R1G7 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb3S4R1G7 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb3S4R1G7 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb3S4R1G7 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb3S4R1G7 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
H2afb3S4R1G7 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb3S4R1G7 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
H2afb3S4R1G7 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
H2afb3S4R1G7 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.44□□□□□ -0.42
H2afb3S4R1G7 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.43□□□□□ -0.42
H2afb3S4R1G7 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.43□□□□□ -0.42
H2afb3S4R1G7 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
H2afb3S4R1G7 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms