Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Hdac6Q9Z2V5 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Hdac6Q9Z2V5 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hdac6Q9Z2V5 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC17.21■□□□□ 0.35
Hdac6Q9Z2V5 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hdac6Q9Z2V5 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC17.21■□□□□ 0.34
Hdac6Q9Z2V5 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Hdac6Q9Z2V5 Abhd6-203ENSMUST00000225234 1958 ntBASIC17.2■□□□□ 0.34
Hdac6Q9Z2V5 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac6Q9Z2V5 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac6Q9Z2V5 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.2■□□□□ 0.34
Hdac6Q9Z2V5 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac6Q9Z2V5 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac6Q9Z2V5 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
Hdac6Q9Z2V5 Gm18630-201ENSMUST00000222109 1397 ntBASIC17.2■□□□□ 0.34
Hdac6Q9Z2V5 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
Hdac6Q9Z2V5 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac6Q9Z2V5 Gm22323-201ENSMUST00000103832 109 ntBASIC17.2■□□□□ 0.34
Hdac6Q9Z2V5 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac6Q9Z2V5 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Hdac6Q9Z2V5 Gm16379-201ENSMUST00000161469 348 ntBASIC17.2■□□□□ 0.34
Hdac6Q9Z2V5 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC17.2■□□□□ 0.34
Hdac6Q9Z2V5 Gm6222-202ENSMUST00000182143 629 ntBASIC17.2■□□□□ 0.34
Hdac6Q9Z2V5 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC17.2■□□□□ 0.34
Hdac6Q9Z2V5 Gm8762-201ENSMUST00000193486 339 ntBASIC17.2■□□□□ 0.34
Hdac6Q9Z2V5 Gm37466-201ENSMUST00000195692 652 ntBASIC17.2■□□□□ 0.34
Hdac6Q9Z2V5 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac6Q9Z2V5 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Hdac6Q9Z2V5 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac6Q9Z2V5 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Hdac6Q9Z2V5 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac6Q9Z2V5 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac6Q9Z2V5 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC17.2■□□□□ 0.34
Hdac6Q9Z2V5 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac6Q9Z2V5 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Hdac6Q9Z2V5 Gm10605-202ENSMUST00000183019 3198 ntBASIC17.2■□□□□ 0.34
Hdac6Q9Z2V5 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hdac6Q9Z2V5 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac6Q9Z2V5 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac6Q9Z2V5 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Hdac6Q9Z2V5 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.19■□□□□ 0.34
Hdac6Q9Z2V5 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac6Q9Z2V5 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Hdac6Q9Z2V5 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.19■□□□□ 0.34
Hdac6Q9Z2V5 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac6Q9Z2V5 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac6Q9Z2V5 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac6Q9Z2V5 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac6Q9Z2V5 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac6Q9Z2V5 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Hdac6Q9Z2V5 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac6Q9Z2V5 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC17.19■□□□□ 0.34
Hdac6Q9Z2V5 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac6Q9Z2V5 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac6Q9Z2V5 Gm29199-201ENSMUST00000187766 775 ntBASIC17.19■□□□□ 0.34
Hdac6Q9Z2V5 Gm38158-201ENSMUST00000194617 339 ntBASIC17.19■□□□□ 0.34
Hdac6Q9Z2V5 AC173210.1-201ENSMUST00000222341 1131 ntBASIC17.19■□□□□ 0.34
Hdac6Q9Z2V5 Gm8227-201ENSMUST00000223306 571 ntBASIC17.19■□□□□ 0.34
Hdac6Q9Z2V5 AC093022.1-201ENSMUST00000226949 1072 ntBASIC17.19■□□□□ 0.34
Hdac6Q9Z2V5 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac6Q9Z2V5 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Hdac6Q9Z2V5 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Hdac6Q9Z2V5 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac6Q9Z2V5 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac6Q9Z2V5 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac6Q9Z2V5 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac6Q9Z2V5 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac6Q9Z2V5 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac6Q9Z2V5 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac6Q9Z2V5 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac6Q9Z2V5 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hdac6Q9Z2V5 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 Mir877-201ENSMUST00000104738 85 ntBASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 Gm7118-201ENSMUST00000200167 1003 ntBASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 Gm10608-202ENSMUST00000213924 676 ntBASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hdac6Q9Z2V5 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms