Protein–RNA interactions for Protein: Q9Z2E2

Mbd1, Methyl-CpG-binding domain protein 1, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd1Q9Z2E2 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Mbd1Q9Z2E2 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 Gm33320-201ENSMUST00000192232 530 ntBASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 Shd-206ENSMUST00000225145 998 ntBASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.11□□□□□ -0.15
Mbd1Q9Z2E2 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Mbd1Q9Z2E2 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mbd1Q9Z2E2 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mbd1Q9Z2E2 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mbd1Q9Z2E2 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Mbd1Q9Z2E2 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Mbd1Q9Z2E2 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Mbd1Q9Z2E2 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Mbd1Q9Z2E2 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Mbd1Q9Z2E2 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms