Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldn13Q9Z0S4 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Cldn13Q9Z0S4 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldn13Q9Z0S4 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cldn13Q9Z0S4 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.36□□□□□ -0.43
Cldn13Q9Z0S4 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cldn13Q9Z0S4 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn13Q9Z0S4 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn13Q9Z0S4 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn13Q9Z0S4 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn13Q9Z0S4 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Cldn13Q9Z0S4 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn13Q9Z0S4 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn13Q9Z0S4 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn13Q9Z0S4 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn13Q9Z0S4 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn13Q9Z0S4 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Cldn13Q9Z0S4 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn13Q9Z0S4 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn13Q9Z0S4 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn13Q9Z0S4 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn13Q9Z0S4 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Cldn13Q9Z0S4 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn13Q9Z0S4 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn13Q9Z0S4 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn13Q9Z0S4 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.35□□□□□ -0.43
Cldn13Q9Z0S4 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.35□□□□□ -0.43
Cldn13Q9Z0S4 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn13Q9Z0S4 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn13Q9Z0S4 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn13Q9Z0S4 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn13Q9Z0S4 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn13Q9Z0S4 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn13Q9Z0S4 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn13Q9Z0S4 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn13Q9Z0S4 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn13Q9Z0S4 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn13Q9Z0S4 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn13Q9Z0S4 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn13Q9Z0S4 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn13Q9Z0S4 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn13Q9Z0S4 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Cldn13Q9Z0S4 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cldn13Q9Z0S4 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Mir7684-201ENSMUST00000183858 60 ntBASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldn13Q9Z0S4 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cldn13Q9Z0S4 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cldn13Q9Z0S4 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn13Q9Z0S4 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Cldn13Q9Z0S4 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Cldn13Q9Z0S4 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn13Q9Z0S4 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldn13Q9Z0S4 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Cldn13Q9Z0S4 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms