Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.31□□□□□ -0.12
Smarcb1Q9Z0H3 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Smarcb1Q9Z0H3 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcb1Q9Z0H3 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcb1Q9Z0H3 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.31□□□□□ -0.12
Smarcb1Q9Z0H3 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcb1Q9Z0H3 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcb1Q9Z0H3 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.31□□□□□ -0.12
Smarcb1Q9Z0H3 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcb1Q9Z0H3 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcb1Q9Z0H3 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcb1Q9Z0H3 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcb1Q9Z0H3 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.31□□□□□ -0.12
Smarcb1Q9Z0H3 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcb1Q9Z0H3 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcb1Q9Z0H3 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcb1Q9Z0H3 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcb1Q9Z0H3 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcb1Q9Z0H3 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcb1Q9Z0H3 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Smarcb1Q9Z0H3 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcb1Q9Z0H3 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.3□□□□□ -0.12
Smarcb1Q9Z0H3 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcb1Q9Z0H3 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcb1Q9Z0H3 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcb1Q9Z0H3 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcb1Q9Z0H3 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Smarcb1Q9Z0H3 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcb1Q9Z0H3 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Smarcb1Q9Z0H3 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.3□□□□□ -0.12
Smarcb1Q9Z0H3 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcb1Q9Z0H3 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Smarcb1Q9Z0H3 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcb1Q9Z0H3 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Smarcb1Q9Z0H3 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcb1Q9Z0H3 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.3□□□□□ -0.12
Smarcb1Q9Z0H3 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Smarcb1Q9Z0H3 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
Smarcb1Q9Z0H3 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Smarcb1Q9Z0H3 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.3□□□□□ -0.12
Smarcb1Q9Z0H3 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcb1Q9Z0H3 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcb1Q9Z0H3 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.3□□□□□ -0.12
Smarcb1Q9Z0H3 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcb1Q9Z0H3 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Smarcb1Q9Z0H3 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcb1Q9Z0H3 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Smarcb1Q9Z0H3 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Smarcb1Q9Z0H3 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcb1Q9Z0H3 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcb1Q9Z0H3 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcb1Q9Z0H3 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcb1Q9Z0H3 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcb1Q9Z0H3 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcb1Q9Z0H3 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Smarcb1Q9Z0H3 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcb1Q9Z0H3 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.29□□□□□ -0.12
Smarcb1Q9Z0H3 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcb1Q9Z0H3 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Smarcb1Q9Z0H3 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcb1Q9Z0H3 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.29□□□□□ -0.12
Smarcb1Q9Z0H3 Gm18473-201ENSMUST00000220543 868 ntBASIC14.29□□□□□ -0.12
Smarcb1Q9Z0H3 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcb1Q9Z0H3 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcb1Q9Z0H3 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Smarcb1Q9Z0H3 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Smarcb1Q9Z0H3 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcb1Q9Z0H3 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcb1Q9Z0H3 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.29□□□□□ -0.12
Smarcb1Q9Z0H3 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.29□□□□□ -0.12
Smarcb1Q9Z0H3 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcb1Q9Z0H3 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Smarcb1Q9Z0H3 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcb1Q9Z0H3 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcb1Q9Z0H3 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcb1Q9Z0H3 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcb1Q9Z0H3 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Smarcb1Q9Z0H3 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Smarcb1Q9Z0H3 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcb1Q9Z0H3 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcb1Q9Z0H3 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcb1Q9Z0H3 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.28□□□□□ -0.12
Smarcb1Q9Z0H3 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcb1Q9Z0H3 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcb1Q9Z0H3 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcb1Q9Z0H3 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Smarcb1Q9Z0H3 Gm13612-201ENSMUST00000119276 390 ntBASIC14.28□□□□□ -0.12
Smarcb1Q9Z0H3 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Smarcb1Q9Z0H3 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcb1Q9Z0H3 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC14.28□□□□□ -0.12
Smarcb1Q9Z0H3 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcb1Q9Z0H3 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.28□□□□□ -0.12
Smarcb1Q9Z0H3 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcb1Q9Z0H3 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.28□□□□□ -0.12
Smarcb1Q9Z0H3 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.28□□□□□ -0.12
Smarcb1Q9Z0H3 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.28□□□□□ -0.12
Smarcb1Q9Z0H3 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcb1Q9Z0H3 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcb1Q9Z0H3 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Smarcb1Q9Z0H3 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms