Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Gm15515-201ENSMUST00000117827 822 ntBASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Gm12390-201ENSMUST00000117897 397 ntBASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Gm12788-201ENSMUST00000119090 308 ntBASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Gm12591-201ENSMUST00000122407 1177 ntBASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Gm9522-201ENSMUST00000182394 926 ntBASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Asb4-202ENSMUST00000183358 1143 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Gm28760-201ENSMUST00000185995 736 ntBASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Ptma-202ENSMUST00000186255 768 ntTSL 2 BASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 AC132384.6-201ENSMUST00000218976 1206 ntBASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 CT030652.1-201ENSMUST00000227377 1235 ntBASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lhx6Q9R1R0 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Gm15236-201ENSMUST00000117309 379 ntBASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Gm13226-201ENSMUST00000117838 404 ntBASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Gm3715-201ENSMUST00000172308 617 ntBASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Gm43596-201ENSMUST00000202818 884 ntBASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Gm18056-201ENSMUST00000207670 568 ntBASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Gm18061-201ENSMUST00000208350 562 ntBASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Gm18063-201ENSMUST00000208529 568 ntBASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Gm18052-201ENSMUST00000208750 559 ntBASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lhx6Q9R1R0 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms