Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Atp6ap1Q9R1Q9 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 Gm20949-201ENSMUST00000206478 952 ntBASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Atp6ap1Q9R1Q9 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Atp6ap1Q9R1Q9 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atp6ap1Q9R1Q9 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Atp6ap1Q9R1Q9 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atp6ap1Q9R1Q9 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Atp6ap1Q9R1Q9 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Atp6ap1Q9R1Q9 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Atp6ap1Q9R1Q9 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.53□□□□□ -0.24
Atp6ap1Q9R1Q9 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atp6ap1Q9R1Q9 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atp6ap1Q9R1Q9 Mir698-201ENSMUST00000102164 109 ntBASIC13.53□□□□□ -0.24
Atp6ap1Q9R1Q9 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Atp6ap1Q9R1Q9 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.53□□□□□ -0.24
Atp6ap1Q9R1Q9 Gm14057-201ENSMUST00000120631 482 ntBASIC13.53□□□□□ -0.24
Atp6ap1Q9R1Q9 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.53□□□□□ -0.24
Atp6ap1Q9R1Q9 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.53□□□□□ -0.24
Atp6ap1Q9R1Q9 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.53□□□□□ -0.24
Atp6ap1Q9R1Q9 Gm8927-201ENSMUST00000181978 981 ntBASIC13.53□□□□□ -0.24
Atp6ap1Q9R1Q9 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.53□□□□□ -0.24
Atp6ap1Q9R1Q9 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.53□□□□□ -0.24
Atp6ap1Q9R1Q9 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.53□□□□□ -0.24
Atp6ap1Q9R1Q9 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.53□□□□□ -0.24
Atp6ap1Q9R1Q9 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atp6ap1Q9R1Q9 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atp6ap1Q9R1Q9 Gm3222-201ENSMUST00000071282 990 ntBASIC13.53□□□□□ -0.24
Atp6ap1Q9R1Q9 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atp6ap1Q9R1Q9 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atp6ap1Q9R1Q9 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Atp6ap1Q9R1Q9 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atp6ap1Q9R1Q9 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Atp6ap1Q9R1Q9 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atp6ap1Q9R1Q9 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atp6ap1Q9R1Q9 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Atp6ap1Q9R1Q9 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atp6ap1Q9R1Q9 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Atp6ap1Q9R1Q9 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atp6ap1Q9R1Q9 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atp6ap1Q9R1Q9 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atp6ap1Q9R1Q9 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Atp6ap1Q9R1Q9 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Atp6ap1Q9R1Q9 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Atp6ap1Q9R1Q9 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Atp6ap1Q9R1Q9 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Atp6ap1Q9R1Q9 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Atp6ap1Q9R1Q9 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Atp6ap1Q9R1Q9 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Atp6ap1Q9R1Q9 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Atp6ap1Q9R1Q9 Gm13385-201ENSMUST00000121089 220 ntBASIC13.52□□□□□ -0.25
Atp6ap1Q9R1Q9 Gm15487-201ENSMUST00000122373 465 ntBASIC13.52□□□□□ -0.25
Atp6ap1Q9R1Q9 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Atp6ap1Q9R1Q9 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Atp6ap1Q9R1Q9 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Atp6ap1Q9R1Q9 Gm27838-201ENSMUST00000184829 128 ntBASIC13.52□□□□□ -0.25
Atp6ap1Q9R1Q9 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Atp6ap1Q9R1Q9 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Atp6ap1Q9R1Q9 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Atp6ap1Q9R1Q9 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms