Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.49□□□□□ -0.25
Cdh17Q9R100 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.49□□□□□ -0.25
Cdh17Q9R100 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh17Q9R100 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh17Q9R100 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh17Q9R100 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh17Q9R100 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh17Q9R100 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh17Q9R100 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh17Q9R100 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh17Q9R100 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh17Q9R100 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh17Q9R100 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh17Q9R100 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdh17Q9R100 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh17Q9R100 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.48□□□□□ -0.25
Cdh17Q9R100 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh17Q9R100 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh17Q9R100 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh17Q9R100 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Cdh17Q9R100 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cdh17Q9R100 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh17Q9R100 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh17Q9R100 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh17Q9R100 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cdh17Q9R100 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh17Q9R100 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh17Q9R100 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cdh17Q9R100 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh17Q9R100 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh17Q9R100 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh17Q9R100 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh17Q9R100 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.48□□□□□ -0.25
Cdh17Q9R100 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh17Q9R100 Gm28630-201ENSMUST00000187806 498 ntBASIC13.48□□□□□ -0.25
Cdh17Q9R100 Gm33320-201ENSMUST00000192232 530 ntBASIC13.48□□□□□ -0.25
Cdh17Q9R100 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.48□□□□□ -0.25
Cdh17Q9R100 Gm43514-201ENSMUST00000198852 424 ntBASIC13.48□□□□□ -0.25
Cdh17Q9R100 Gm18041-201ENSMUST00000218210 618 ntBASIC13.48□□□□□ -0.25
Cdh17Q9R100 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.48□□□□□ -0.25
Cdh17Q9R100 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh17Q9R100 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh17Q9R100 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh17Q9R100 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.48□□□□□ -0.25
Cdh17Q9R100 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh17Q9R100 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh17Q9R100 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh17Q9R100 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh17Q9R100 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh17Q9R100 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh17Q9R100 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh17Q9R100 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdh17Q9R100 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh17Q9R100 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh17Q9R100 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh17Q9R100 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh17Q9R100 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh17Q9R100 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh17Q9R100 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh17Q9R100 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh17Q9R100 Mir698-201ENSMUST00000102164 109 ntBASIC13.47□□□□□ -0.25
Cdh17Q9R100 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cdh17Q9R100 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.47□□□□□ -0.25
Cdh17Q9R100 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.47□□□□□ -0.25
Cdh17Q9R100 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Cdh17Q9R100 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.47□□□□□ -0.25
Cdh17Q9R100 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.47□□□□□ -0.25
Cdh17Q9R100 Gm10253-201ENSMUST00000194270 940 ntBASIC13.47□□□□□ -0.25
Cdh17Q9R100 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh17Q9R100 Gm5779-201ENSMUST00000218467 910 ntBASIC13.47□□□□□ -0.25
Cdh17Q9R100 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.47□□□□□ -0.25
Cdh17Q9R100 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh17Q9R100 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.47□□□□□ -0.25
Cdh17Q9R100 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Cdh17Q9R100 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh17Q9R100 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh17Q9R100 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh17Q9R100 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh17Q9R100 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh17Q9R100 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh17Q9R100 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh17Q9R100 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Cdh17Q9R100 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh17Q9R100 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh17Q9R100 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh17Q9R100 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh17Q9R100 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh17Q9R100 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.46□□□□□ -0.25
Cdh17Q9R100 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh17Q9R100 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh17Q9R100 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh17Q9R100 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh17Q9R100 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh17Q9R100 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh17Q9R100 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh17Q9R100 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh17Q9R100 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cdh17Q9R100 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.46□□□□□ -0.25
Cdh17Q9R100 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Cdh17Q9R100 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms