Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.58□□□□□ -0.4
Clcf1Q9QZM3 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clcf1Q9QZM3 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
Clcf1Q9QZM3 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clcf1Q9QZM3 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clcf1Q9QZM3 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clcf1Q9QZM3 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.58□□□□□ -0.4
Clcf1Q9QZM3 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Clcf1Q9QZM3 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.58□□□□□ -0.4
Clcf1Q9QZM3 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.58□□□□□ -0.4
Clcf1Q9QZM3 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.58□□□□□ -0.4
Clcf1Q9QZM3 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clcf1Q9QZM3 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clcf1Q9QZM3 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clcf1Q9QZM3 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Clcf1Q9QZM3 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clcf1Q9QZM3 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Clcf1Q9QZM3 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clcf1Q9QZM3 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clcf1Q9QZM3 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clcf1Q9QZM3 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Clcf1Q9QZM3 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.57□□□□□ -0.4
Clcf1Q9QZM3 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clcf1Q9QZM3 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clcf1Q9QZM3 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clcf1Q9QZM3 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clcf1Q9QZM3 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.57□□□□□ -0.4
Clcf1Q9QZM3 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Clcf1Q9QZM3 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.57□□□□□ -0.4
Clcf1Q9QZM3 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.57□□□□□ -0.4
Clcf1Q9QZM3 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.57□□□□□ -0.4
Clcf1Q9QZM3 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.57□□□□□ -0.4
Clcf1Q9QZM3 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.57□□□□□ -0.4
Clcf1Q9QZM3 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.57□□□□□ -0.4
Clcf1Q9QZM3 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clcf1Q9QZM3 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clcf1Q9QZM3 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Clcf1Q9QZM3 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Clcf1Q9QZM3 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clcf1Q9QZM3 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clcf1Q9QZM3 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.57□□□□□ -0.4
Clcf1Q9QZM3 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.57□□□□□ -0.4
Clcf1Q9QZM3 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clcf1Q9QZM3 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clcf1Q9QZM3 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clcf1Q9QZM3 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Clcf1Q9QZM3 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clcf1Q9QZM3 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Clcf1Q9QZM3 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Clcf1Q9QZM3 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.56□□□□□ -0.4
Clcf1Q9QZM3 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clcf1Q9QZM3 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Clcf1Q9QZM3 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.56□□□□□ -0.4
Clcf1Q9QZM3 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clcf1Q9QZM3 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Clcf1Q9QZM3 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Clcf1Q9QZM3 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clcf1Q9QZM3 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Clcf1Q9QZM3 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Clcf1Q9QZM3 Gm22189-201ENSMUST00000103822 86 ntBASIC12.56□□□□□ -0.4
Clcf1Q9QZM3 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.56□□□□□ -0.4
Clcf1Q9QZM3 Gm9522-201ENSMUST00000182394 926 ntBASIC12.56□□□□□ -0.4
Clcf1Q9QZM3 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.56□□□□□ -0.4
Clcf1Q9QZM3 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clcf1Q9QZM3 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clcf1Q9QZM3 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.56□□□□□ -0.4
Clcf1Q9QZM3 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Clcf1Q9QZM3 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clcf1Q9QZM3 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clcf1Q9QZM3 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clcf1Q9QZM3 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clcf1Q9QZM3 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clcf1Q9QZM3 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clcf1Q9QZM3 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clcf1Q9QZM3 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.56□□□□□ -0.4
Clcf1Q9QZM3 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Clcf1Q9QZM3 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clcf1Q9QZM3 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clcf1Q9QZM3 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Clcf1Q9QZM3 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clcf1Q9QZM3 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clcf1Q9QZM3 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clcf1Q9QZM3 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clcf1Q9QZM3 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clcf1Q9QZM3 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Clcf1Q9QZM3 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clcf1Q9QZM3 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Clcf1Q9QZM3 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Clcf1Q9QZM3 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clcf1Q9QZM3 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clcf1Q9QZM3 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clcf1Q9QZM3 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clcf1Q9QZM3 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clcf1Q9QZM3 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clcf1Q9QZM3 Gm15460-201ENSMUST00000118147 391 ntBASIC12.55□□□□□ -0.4
Clcf1Q9QZM3 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Clcf1Q9QZM3 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Clcf1Q9QZM3 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Clcf1Q9QZM3 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.55□□□□□ -0.4
Clcf1Q9QZM3 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms