Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Gm43094-201ENSMUST00000196549 921 ntBASIC14.85□□□□□ -0.03
Cpsf3Q9QXK7 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.85□□□□□ -0.03
Cpsf3Q9QXK7 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf3Q9QXK7 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf3Q9QXK7 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf3Q9QXK7 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cpsf3Q9QXK7 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.85□□□□□ -0.03
Cpsf3Q9QXK7 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf3Q9QXK7 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf3Q9QXK7 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf3Q9QXK7 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Cpsf3Q9QXK7 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf3Q9QXK7 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cpsf3Q9QXK7 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cpsf3Q9QXK7 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Gm12341-201ENSMUST00000119724 503 ntBASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Mir6392-201ENSMUST00000184924 108 ntBASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Gm19078-201ENSMUST00000206311 727 ntBASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf3Q9QXK7 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.83□□□□□ -0.03
Cpsf3Q9QXK7 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Cpsf3Q9QXK7 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cpsf3Q9QXK7 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cpsf3Q9QXK7 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Cpsf3Q9QXK7 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cpsf3Q9QXK7 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
Cpsf3Q9QXK7 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Cpsf3Q9QXK7 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf3Q9QXK7 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.83□□□□□ -0.04
Cpsf3Q9QXK7 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf3Q9QXK7 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.83□□□□□ -0.04
Cpsf3Q9QXK7 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf3Q9QXK7 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Cpsf3Q9QXK7 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf3Q9QXK7 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.83□□□□□ -0.04
Cpsf3Q9QXK7 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf3Q9QXK7 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.83□□□□□ -0.04
Cpsf3Q9QXK7 Gm18018-201ENSMUST00000198273 408 ntBASIC14.83□□□□□ -0.04
Cpsf3Q9QXK7 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.83□□□□□ -0.04
Cpsf3Q9QXK7 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf3Q9QXK7 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf3Q9QXK7 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf3Q9QXK7 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf3Q9QXK7 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf3Q9QXK7 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf3Q9QXK7 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Cpsf3Q9QXK7 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.83□□□□□ -0.04
Cpsf3Q9QXK7 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf3Q9QXK7 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf3Q9QXK7 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf3Q9QXK7 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Cpsf3Q9QXK7 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf3Q9QXK7 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf3Q9QXK7 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf3Q9QXK7 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Cpsf3Q9QXK7 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Cpsf3Q9QXK7 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf3Q9QXK7 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms