Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco4Q9JIS3 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.05□□□□□ -0.64
Smco4Q9JIS3 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Smco4Q9JIS3 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Smco4Q9JIS3 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco4Q9JIS3 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC11.05□□□□□ -0.64
Smco4Q9JIS3 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco4Q9JIS3 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC11.05□□□□□ -0.64
Smco4Q9JIS3 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Smco4Q9JIS3 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Smco4Q9JIS3 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.05□□□□□ -0.64
Smco4Q9JIS3 Syt7-205ENSMUST00000224135 1557 ntBASIC11.05□□□□□ -0.64
Smco4Q9JIS3 AC159205.6-201ENSMUST00000224935 887 ntBASIC11.05□□□□□ -0.64
Smco4Q9JIS3 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco4Q9JIS3 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco4Q9JIS3 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Smco4Q9JIS3 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco4Q9JIS3 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco4Q9JIS3 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco4Q9JIS3 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco4Q9JIS3 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco4Q9JIS3 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco4Q9JIS3 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco4Q9JIS3 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Smco4Q9JIS3 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Smco4Q9JIS3 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco4Q9JIS3 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco4Q9JIS3 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco4Q9JIS3 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco4Q9JIS3 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco4Q9JIS3 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Smco4Q9JIS3 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco4Q9JIS3 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smco4Q9JIS3 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Zkscan4-202ENSMUST00000225845 1506 ntBASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Gm8344-201ENSMUST00000119813 856 ntBASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Mir5130-201ENSMUST00000175160 84 ntBASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Gm9172-201ENSMUST00000212092 954 ntBASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Gm12020-201ENSMUST00000119030 2042 ntBASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smco4Q9JIS3 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco4Q9JIS3 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smco4Q9JIS3 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Smco4Q9JIS3 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Smco4Q9JIS3 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms