Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup50Q9JIH2 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.6□□□□□ -0.07
Nup50Q9JIH2 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nup50Q9JIH2 Gm27622-201ENSMUST00000183779 60 ntBASIC14.6□□□□□ -0.07
Nup50Q9JIH2 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.6□□□□□ -0.07
Nup50Q9JIH2 Gm21470-201ENSMUST00000187680 696 ntBASIC14.6□□□□□ -0.07
Nup50Q9JIH2 Gm2756-201ENSMUST00000195851 400 ntBASIC14.6□□□□□ -0.07
Nup50Q9JIH2 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup50Q9JIH2 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup50Q9JIH2 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup50Q9JIH2 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nup50Q9JIH2 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup50Q9JIH2 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.6□□□□□ -0.07
Nup50Q9JIH2 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nup50Q9JIH2 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup50Q9JIH2 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup50Q9JIH2 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nup50Q9JIH2 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup50Q9JIH2 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup50Q9JIH2 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup50Q9JIH2 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Nup50Q9JIH2 Grk6-205ENSMUST00000224653 2976 ntBASIC14.6□□□□□ -0.07
Nup50Q9JIH2 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup50Q9JIH2 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nup50Q9JIH2 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.59□□□□□ -0.07
Nup50Q9JIH2 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup50Q9JIH2 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Nup50Q9JIH2 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup50Q9JIH2 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.59□□□□□ -0.07
Nup50Q9JIH2 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Nup50Q9JIH2 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
Nup50Q9JIH2 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Nup50Q9JIH2 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup50Q9JIH2 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.59□□□□□ -0.07
Nup50Q9JIH2 Gm18041-201ENSMUST00000218210 618 ntBASIC14.59□□□□□ -0.07
Nup50Q9JIH2 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.59□□□□□ -0.07
Nup50Q9JIH2 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup50Q9JIH2 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup50Q9JIH2 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Nup50Q9JIH2 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup50Q9JIH2 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup50Q9JIH2 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup50Q9JIH2 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.59□□□□□ -0.07
Nup50Q9JIH2 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nup50Q9JIH2 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Nup50Q9JIH2 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nup50Q9JIH2 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nup50Q9JIH2 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nup50Q9JIH2 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nup50Q9JIH2 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nup50Q9JIH2 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nup50Q9JIH2 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Nup50Q9JIH2 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup50Q9JIH2 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup50Q9JIH2 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup50Q9JIH2 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup50Q9JIH2 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Nup50Q9JIH2 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.58□□□□□ -0.08
Nup50Q9JIH2 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.58□□□□□ -0.08
Nup50Q9JIH2 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Nup50Q9JIH2 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nup50Q9JIH2 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.58□□□□□ -0.08
Nup50Q9JIH2 Gm9229-201ENSMUST00000222777 126 ntBASIC14.58□□□□□ -0.08
Nup50Q9JIH2 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup50Q9JIH2 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup50Q9JIH2 Gm8396-201ENSMUST00000057361 823 ntBASIC14.58□□□□□ -0.08
Nup50Q9JIH2 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup50Q9JIH2 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup50Q9JIH2 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nup50Q9JIH2 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.58□□□□□ -0.08
Nup50Q9JIH2 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup50Q9JIH2 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nup50Q9JIH2 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nup50Q9JIH2 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup50Q9JIH2 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Nup50Q9JIH2 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.58□□□□□ -0.08
Nup50Q9JIH2 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.58□□□□□ -0.08
Nup50Q9JIH2 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Nup50Q9JIH2 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup50Q9JIH2 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup50Q9JIH2 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Nup50Q9JIH2 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup50Q9JIH2 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup50Q9JIH2 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup50Q9JIH2 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Nup50Q9JIH2 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Nup50Q9JIH2 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup50Q9JIH2 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
Nup50Q9JIH2 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup50Q9JIH2 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup50Q9JIH2 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup50Q9JIH2 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nup50Q9JIH2 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nup50Q9JIH2 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Nup50Q9JIH2 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup50Q9JIH2 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup50Q9JIH2 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Nup50Q9JIH2 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Nup50Q9JIH2 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Nup50Q9JIH2 Gm25144-201ENSMUST00000179561 110 ntBASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms