Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC16.39■□□□□ 0.22
Ube3bQ9ES34 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube3bQ9ES34 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube3bQ9ES34 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube3bQ9ES34 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube3bQ9ES34 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube3bQ9ES34 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube3bQ9ES34 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube3bQ9ES34 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube3bQ9ES34 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC16.39■□□□□ 0.21
Ube3bQ9ES34 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube3bQ9ES34 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube3bQ9ES34 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube3bQ9ES34 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube3bQ9ES34 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ube3bQ9ES34 Gm15371-201ENSMUST00000117057 784 ntBASIC16.39■□□□□ 0.21
Ube3bQ9ES34 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Ube3bQ9ES34 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Ube3bQ9ES34 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ube3bQ9ES34 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ube3bQ9ES34 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ube3bQ9ES34 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ube3bQ9ES34 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube3bQ9ES34 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ube3bQ9ES34 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube3bQ9ES34 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ube3bQ9ES34 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube3bQ9ES34 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Ube3bQ9ES34 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ube3bQ9ES34 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ube3bQ9ES34 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube3bQ9ES34 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube3bQ9ES34 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube3bQ9ES34 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC16.39■□□□□ 0.21
Ube3bQ9ES34 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC16.39■□□□□ 0.21
Ube3bQ9ES34 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube3bQ9ES34 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ube3bQ9ES34 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ube3bQ9ES34 Gm42872-201ENSMUST00000200026 1967 ntBASIC16.38■□□□□ 0.21
Ube3bQ9ES34 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube3bQ9ES34 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ube3bQ9ES34 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube3bQ9ES34 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC16.38■□□□□ 0.21
Ube3bQ9ES34 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube3bQ9ES34 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ube3bQ9ES34 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ube3bQ9ES34 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ube3bQ9ES34 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube3bQ9ES34 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube3bQ9ES34 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube3bQ9ES34 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC16.38■□□□□ 0.21
Ube3bQ9ES34 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC16.38■□□□□ 0.21
Ube3bQ9ES34 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ube3bQ9ES34 AC130829.1-201ENSMUST00000221548 494 ntBASIC16.38■□□□□ 0.21
Ube3bQ9ES34 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC16.38■□□□□ 0.21
Ube3bQ9ES34 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube3bQ9ES34 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ube3bQ9ES34 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube3bQ9ES34 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube3bQ9ES34 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube3bQ9ES34 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube3bQ9ES34 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ube3bQ9ES34 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ube3bQ9ES34 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ube3bQ9ES34 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ube3bQ9ES34 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ube3bQ9ES34 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ube3bQ9ES34 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Ube3bQ9ES34 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Ube3bQ9ES34 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ube3bQ9ES34 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ube3bQ9ES34 Gm12928-201ENSMUST00000117115 573 ntBASIC16.37■□□□□ 0.21
Ube3bQ9ES34 Gm12537-201ENSMUST00000119266 1002 ntBASIC16.37■□□□□ 0.21
Ube3bQ9ES34 Gm12070-201ENSMUST00000119551 1002 ntBASIC16.37■□□□□ 0.21
Ube3bQ9ES34 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ube3bQ9ES34 Gm12671-201ENSMUST00000119978 1002 ntBASIC16.37■□□□□ 0.21
Ube3bQ9ES34 Gm13292-201ENSMUST00000120014 1000 ntBASIC16.37■□□□□ 0.21
Ube3bQ9ES34 Gm12403-201ENSMUST00000121384 959 ntBASIC16.37■□□□□ 0.21
Ube3bQ9ES34 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Ube3bQ9ES34 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ube3bQ9ES34 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ube3bQ9ES34 Gm10359-201ENSMUST00000180167 1002 ntBASIC16.37■□□□□ 0.21
Ube3bQ9ES34 Gm12033-201ENSMUST00000180654 1002 ntBASIC16.37■□□□□ 0.21
Ube3bQ9ES34 Gm5559-201ENSMUST00000180755 1002 ntBASIC16.37■□□□□ 0.21
Ube3bQ9ES34 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ube3bQ9ES34 Gm4335-201ENSMUST00000182581 1004 ntBASIC16.37■□□□□ 0.21
Ube3bQ9ES34 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ube3bQ9ES34 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ube3bQ9ES34 Gm44397-201ENSMUST00000195950 113 ntBASIC16.37■□□□□ 0.21
Ube3bQ9ES34 Gm42550-201ENSMUST00000201553 960 ntBASIC16.37■□□□□ 0.21
Ube3bQ9ES34 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC16.37■□□□□ 0.21
Ube3bQ9ES34 Gm5035-201ENSMUST00000215581 927 ntBASIC16.37■□□□□ 0.21
Ube3bQ9ES34 Gm17870-201ENSMUST00000219489 1174 ntBASIC16.37■□□□□ 0.21
Ube3bQ9ES34 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ube3bQ9ES34 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Ube3bQ9ES34 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ube3bQ9ES34 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ube3bQ9ES34 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ube3bQ9ES34 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ube3bQ9ES34 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms