Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb3Q9ERD7 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb3Q9ERD7 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb3Q9ERD7 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb3Q9ERD7 Gm5566-201ENSMUST00000116118 459 ntBASIC13.76□□□□□ -0.21
Tubb3Q9ERD7 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb3Q9ERD7 Gm44344-201ENSMUST00000200287 129 ntBASIC13.76□□□□□ -0.21
Tubb3Q9ERD7 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.76□□□□□ -0.21
Tubb3Q9ERD7 Gm18041-201ENSMUST00000218210 618 ntBASIC13.76□□□□□ -0.21
Tubb3Q9ERD7 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb3Q9ERD7 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb3Q9ERD7 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb3Q9ERD7 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb3Q9ERD7 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Tubb3Q9ERD7 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb3Q9ERD7 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb3Q9ERD7 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Tubb3Q9ERD7 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb3Q9ERD7 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Tubb3Q9ERD7 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb3Q9ERD7 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb3Q9ERD7 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb3Q9ERD7 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb3Q9ERD7 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb3Q9ERD7 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb3Q9ERD7 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb3Q9ERD7 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Tubb3Q9ERD7 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb3Q9ERD7 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb3Q9ERD7 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb3Q9ERD7 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb3Q9ERD7 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb3Q9ERD7 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb3Q9ERD7 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb3Q9ERD7 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb3Q9ERD7 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb3Q9ERD7 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.75□□□□□ -0.21
Tubb3Q9ERD7 Gm6222-201ENSMUST00000120787 396 ntBASIC13.75□□□□□ -0.21
Tubb3Q9ERD7 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.75□□□□□ -0.21
Tubb3Q9ERD7 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb3Q9ERD7 Gm27437-201ENSMUST00000183429 107 ntBASIC13.75□□□□□ -0.21
Tubb3Q9ERD7 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Tubb3Q9ERD7 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.75□□□□□ -0.21
Tubb3Q9ERD7 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb3Q9ERD7 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb3Q9ERD7 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb3Q9ERD7 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb3Q9ERD7 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.75□□□□□ -0.21
Tubb3Q9ERD7 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb3Q9ERD7 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb3Q9ERD7 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb3Q9ERD7 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb3Q9ERD7 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb3Q9ERD7 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb3Q9ERD7 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb3Q9ERD7 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb3Q9ERD7 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb3Q9ERD7 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb3Q9ERD7 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Tubb3Q9ERD7 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Tubb3Q9ERD7 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.74□□□□□ -0.21
Tubb3Q9ERD7 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb3Q9ERD7 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.74□□□□□ -0.21
Tubb3Q9ERD7 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.74□□□□□ -0.21
Tubb3Q9ERD7 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb3Q9ERD7 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb3Q9ERD7 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb3Q9ERD7 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.74□□□□□ -0.21
Tubb3Q9ERD7 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb3Q9ERD7 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb3Q9ERD7 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.74□□□□□ -0.21
Tubb3Q9ERD7 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.74□□□□□ -0.21
Tubb3Q9ERD7 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb3Q9ERD7 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Tubb3Q9ERD7 Gm27680-201ENSMUST00000184192 160 ntBASIC13.74□□□□□ -0.21
Tubb3Q9ERD7 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.74□□□□□ -0.21
Tubb3Q9ERD7 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb3Q9ERD7 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.74□□□□□ -0.21
Tubb3Q9ERD7 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Tubb3Q9ERD7 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.74□□□□□ -0.21
Tubb3Q9ERD7 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb3Q9ERD7 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb3Q9ERD7 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Tubb3Q9ERD7 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb3Q9ERD7 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb3Q9ERD7 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb3Q9ERD7 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb3Q9ERD7 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Tubb3Q9ERD7 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Tubb3Q9ERD7 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb3Q9ERD7 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb3Q9ERD7 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb3Q9ERD7 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Tubb3Q9ERD7 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb3Q9ERD7 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb3Q9ERD7 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb3Q9ERD7 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb3Q9ERD7 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tubb3Q9ERD7 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms