Protein–RNA interactions for Protein: Q9EQR5

Lime1, Lck-interacting transmembrane adapter 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1Q9EQR5 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lime1Q9EQR5 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lime1Q9EQR5 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lime1Q9EQR5 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lime1Q9EQR5 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lime1Q9EQR5 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Lime1Q9EQR5 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lime1Q9EQR5 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lime1Q9EQR5 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lime1Q9EQR5 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Lime1Q9EQR5 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lime1Q9EQR5 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.48
Lime1Q9EQR5 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lime1Q9EQR5 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lime1Q9EQR5 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lime1Q9EQR5 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Lime1Q9EQR5 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lime1Q9EQR5 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lime1Q9EQR5 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lime1Q9EQR5 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Lime1Q9EQR5 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lime1Q9EQR5 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Lime1Q9EQR5 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Lime1Q9EQR5 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lime1Q9EQR5 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.02□□□□□ -0.49
Lime1Q9EQR5 Gm15467-201ENSMUST00000120582 445 ntBASIC12.02□□□□□ -0.49
Lime1Q9EQR5 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Lime1Q9EQR5 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.02□□□□□ -0.49
Lime1Q9EQR5 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.02□□□□□ -0.49
Lime1Q9EQR5 Gm6916-202ENSMUST00000205523 195 ntBASIC12.02□□□□□ -0.49
Lime1Q9EQR5 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.02□□□□□ -0.49
Lime1Q9EQR5 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lime1Q9EQR5 Gm15500-202ENSMUST00000071641 1019 ntBASIC12.02□□□□□ -0.49
Lime1Q9EQR5 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lime1Q9EQR5 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lime1Q9EQR5 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.02□□□□□ -0.49
Lime1Q9EQR5 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lime1Q9EQR5 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lime1Q9EQR5 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.02□□□□□ -0.49
Lime1Q9EQR5 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.02□□□□□ -0.49
Lime1Q9EQR5 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lime1Q9EQR5 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Lime1Q9EQR5 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lime1Q9EQR5 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lime1Q9EQR5 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lime1Q9EQR5 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lime1Q9EQR5 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lime1Q9EQR5 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lime1Q9EQR5 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lime1Q9EQR5 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lime1Q9EQR5 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Lime1Q9EQR5 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lime1Q9EQR5 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lime1Q9EQR5 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lime1Q9EQR5 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Lime1Q9EQR5 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lime1Q9EQR5 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lime1Q9EQR5 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.01□□□□□ -0.49
Lime1Q9EQR5 Gm13365-201ENSMUST00000121188 973 ntBASIC12.01□□□□□ -0.49
Lime1Q9EQR5 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lime1Q9EQR5 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lime1Q9EQR5 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lime1Q9EQR5 Gm25911-201ENSMUST00000157621 56 ntBASIC12.01□□□□□ -0.49
Lime1Q9EQR5 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lime1Q9EQR5 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Lime1Q9EQR5 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.01□□□□□ -0.49
Lime1Q9EQR5 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lime1Q9EQR5 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lime1Q9EQR5 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lime1Q9EQR5 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lime1Q9EQR5 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lime1Q9EQR5 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lime1Q9EQR5 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lime1Q9EQR5 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lime1Q9EQR5 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lime1Q9EQR5 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.01□□□□□ -0.49
Lime1Q9EQR5 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.01□□□□□ -0.49
Lime1Q9EQR5 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lime1Q9EQR5 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lime1Q9EQR5 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lime1Q9EQR5 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.01□□□□□ -0.49
Lime1Q9EQR5 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Lime1Q9EQR5 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Lime1Q9EQR5 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lime1Q9EQR5 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lime1Q9EQR5 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lime1Q9EQR5 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lime1Q9EQR5 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Lime1Q9EQR5 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Lime1Q9EQR5 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Lime1Q9EQR5 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lime1Q9EQR5 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lime1Q9EQR5 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lime1Q9EQR5 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Lime1Q9EQR5 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lime1Q9EQR5 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lime1Q9EQR5 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lime1Q9EQR5 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12□□□□□ -0.49
Lime1Q9EQR5 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lime1Q9EQR5 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms