Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpsf1Q9EPU4 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cpsf1Q9EPU4 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Cpsf1Q9EPU4 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpsf1Q9EPU4 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpsf1Q9EPU4 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpsf1Q9EPU4 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpsf1Q9EPU4 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC18.86■□□□□ 0.61
Cpsf1Q9EPU4 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf1Q9EPU4 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf1Q9EPU4 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf1Q9EPU4 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf1Q9EPU4 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Cpsf1Q9EPU4 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf1Q9EPU4 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf1Q9EPU4 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf1Q9EPU4 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf1Q9EPU4 Gm27731-201ENSMUST00000185192 107 ntBASIC18.86■□□□□ 0.61
Cpsf1Q9EPU4 Gm7553-201ENSMUST00000185805 1426 ntBASIC18.86■□□□□ 0.61
Cpsf1Q9EPU4 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf1Q9EPU4 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf1Q9EPU4 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Cpsf1Q9EPU4 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf1Q9EPU4 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf1Q9EPU4 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf1Q9EPU4 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf1Q9EPU4 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf1Q9EPU4 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf1Q9EPU4 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf1Q9EPU4 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf1Q9EPU4 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cpsf1Q9EPU4 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf1Q9EPU4 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf1Q9EPU4 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf1Q9EPU4 Gm12203-201ENSMUST00000118235 598 ntBASIC18.85■□□□□ 0.61
Cpsf1Q9EPU4 Gm12209-201ENSMUST00000120089 596 ntBASIC18.85■□□□□ 0.61
Cpsf1Q9EPU4 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC18.85■□□□□ 0.61
Cpsf1Q9EPU4 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Cpsf1Q9EPU4 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC18.85■□□□□ 0.61
Cpsf1Q9EPU4 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC18.85■□□□□ 0.61
Cpsf1Q9EPU4 AC154595.3-201ENSMUST00000224579 384 ntBASIC18.85■□□□□ 0.61
Cpsf1Q9EPU4 AC134335.2-201ENSMUST00000227660 440 ntBASIC18.85■□□□□ 0.61
Cpsf1Q9EPU4 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC18.85■□□□□ 0.61
Cpsf1Q9EPU4 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf1Q9EPU4 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf1Q9EPU4 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf1Q9EPU4 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf1Q9EPU4 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf1Q9EPU4 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf1Q9EPU4 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC18.85■□□□□ 0.61
Cpsf1Q9EPU4 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf1Q9EPU4 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Cpsf1Q9EPU4 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf1Q9EPU4 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Cpsf1Q9EPU4 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf1Q9EPU4 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf1Q9EPU4 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf1Q9EPU4 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Cpsf1Q9EPU4 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf1Q9EPU4 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf1Q9EPU4 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf1Q9EPU4 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Cpsf1Q9EPU4 Gm12742-201ENSMUST00000117326 410 ntBASIC18.84■□□□□ 0.61
Cpsf1Q9EPU4 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf1Q9EPU4 Gm27331-201ENSMUST00000183705 60 ntBASIC18.84■□□□□ 0.61
Cpsf1Q9EPU4 Gm29649-201ENSMUST00000185649 419 ntBASIC18.84■□□□□ 0.61
Cpsf1Q9EPU4 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC18.84■□□□□ 0.61
Cpsf1Q9EPU4 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf1Q9EPU4 Gm45331-201ENSMUST00000209868 554 ntBASIC18.84■□□□□ 0.61
Cpsf1Q9EPU4 AC140451.2-201ENSMUST00000228030 664 ntBASIC18.84■□□□□ 0.61
Cpsf1Q9EPU4 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf1Q9EPU4 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Cpsf1Q9EPU4 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf1Q9EPU4 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf1Q9EPU4 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf1Q9EPU4 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf1Q9EPU4 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf1Q9EPU4 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf1Q9EPU4 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Cpsf1Q9EPU4 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf1Q9EPU4 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf1Q9EPU4 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf1Q9EPU4 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf1Q9EPU4 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf1Q9EPU4 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf1Q9EPU4 Gm16177-201ENSMUST00000120728 718 ntBASIC18.83■□□□□ 0.61
Cpsf1Q9EPU4 Gm11978-201ENSMUST00000122315 466 ntBASIC18.83■□□□□ 0.61
Cpsf1Q9EPU4 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Cpsf1Q9EPU4 Gm9728-201ENSMUST00000200197 1055 ntBASIC18.83■□□□□ 0.61
Cpsf1Q9EPU4 AC122305.4-201ENSMUST00000216159 1206 ntBASIC18.83■□□□□ 0.61
Cpsf1Q9EPU4 AC155237.1-201ENSMUST00000226196 1279 ntBASIC18.83■□□□□ 0.61
Cpsf1Q9EPU4 AC126253.1-201ENSMUST00000227974 824 ntBASIC18.83■□□□□ 0.61
Cpsf1Q9EPU4 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cpsf1Q9EPU4 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cpsf1Q9EPU4 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cpsf1Q9EPU4 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cpsf1Q9EPU4 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cpsf1Q9EPU4 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Cpsf1Q9EPU4 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC18.83■□□□□ 0.61
Cpsf1Q9EPU4 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms