Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC17.42■□□□□ 0.38
Chmp4bQ9D8B3 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.42■□□□□ 0.38
Chmp4bQ9D8B3 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Chmp4bQ9D8B3 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp4bQ9D8B3 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Chmp4bQ9D8B3 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp4bQ9D8B3 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp4bQ9D8B3 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp4bQ9D8B3 Mir497b-201ENSMUST00000093601 125 ntBASIC17.42■□□□□ 0.38
Chmp4bQ9D8B3 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp4bQ9D8B3 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp4bQ9D8B3 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC17.42■□□□□ 0.38
Chmp4bQ9D8B3 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp4bQ9D8B3 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp4bQ9D8B3 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp4bQ9D8B3 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp4bQ9D8B3 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp4bQ9D8B3 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp4bQ9D8B3 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp4bQ9D8B3 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp4bQ9D8B3 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC17.42■□□□□ 0.38
Chmp4bQ9D8B3 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC17.41■□□□□ 0.38
Chmp4bQ9D8B3 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp4bQ9D8B3 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp4bQ9D8B3 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp4bQ9D8B3 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC17.41■□□□□ 0.38
Chmp4bQ9D8B3 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp4bQ9D8B3 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Chmp4bQ9D8B3 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp4bQ9D8B3 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp4bQ9D8B3 Gm6912-201ENSMUST00000117218 544 ntBASIC17.41■□□□□ 0.38
Chmp4bQ9D8B3 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Chmp4bQ9D8B3 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp4bQ9D8B3 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC17.41■□□□□ 0.38
Chmp4bQ9D8B3 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Chmp4bQ9D8B3 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp4bQ9D8B3 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC17.41■□□□□ 0.38
Chmp4bQ9D8B3 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp4bQ9D8B3 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp4bQ9D8B3 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp4bQ9D8B3 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp4bQ9D8B3 AC159621.2-201ENSMUST00000223519 1326 ntBASIC17.41■□□□□ 0.38
Chmp4bQ9D8B3 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp4bQ9D8B3 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
Chmp4bQ9D8B3 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC17.41■□□□□ 0.38
Chmp4bQ9D8B3 Gm8337-201ENSMUST00000187358 1938 ntBASIC17.41■□□□□ 0.38
Chmp4bQ9D8B3 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC17.41■□□□□ 0.38
Chmp4bQ9D8B3 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Chmp4bQ9D8B3 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Chmp4bQ9D8B3 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4bQ9D8B3 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4bQ9D8B3 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4bQ9D8B3 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4bQ9D8B3 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Chmp4bQ9D8B3 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4bQ9D8B3 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4bQ9D8B3 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4bQ9D8B3 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4bQ9D8B3 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC17.4■□□□□ 0.38
Chmp4bQ9D8B3 Gm5422-201ENSMUST00000050717 2721 ntBASIC17.4■□□□□ 0.38
Chmp4bQ9D8B3 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4bQ9D8B3 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4bQ9D8B3 Gm11557-201ENSMUST00000120200 1008 ntBASIC17.4■□□□□ 0.38
Chmp4bQ9D8B3 Gm13385-201ENSMUST00000121089 220 ntBASIC17.4■□□□□ 0.38
Chmp4bQ9D8B3 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC17.4■□□□□ 0.38
Chmp4bQ9D8B3 Gm8927-201ENSMUST00000181978 981 ntBASIC17.4■□□□□ 0.38
Chmp4bQ9D8B3 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC17.4■□□□□ 0.38
Chmp4bQ9D8B3 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4bQ9D8B3 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4bQ9D8B3 Gm3222-201ENSMUST00000071282 990 ntBASIC17.4■□□□□ 0.38
Chmp4bQ9D8B3 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4bQ9D8B3 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4bQ9D8B3 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4bQ9D8B3 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4bQ9D8B3 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Chmp4bQ9D8B3 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4bQ9D8B3 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Chmp4bQ9D8B3 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Chmp4bQ9D8B3 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp4bQ9D8B3 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp4bQ9D8B3 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp4bQ9D8B3 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp4bQ9D8B3 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Chmp4bQ9D8B3 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp4bQ9D8B3 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp4bQ9D8B3 Gm45779-201ENSMUST00000212189 4064 ntBASIC17.39■□□□□ 0.37
Chmp4bQ9D8B3 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp4bQ9D8B3 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp4bQ9D8B3 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp4bQ9D8B3 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp4bQ9D8B3 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp4bQ9D8B3 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Chmp4bQ9D8B3 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Chmp4bQ9D8B3 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Chmp4bQ9D8B3 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Chmp4bQ9D8B3 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp4bQ9D8B3 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chmp4bQ9D8B3 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp4bQ9D8B3 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chmp4bQ9D8B3 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms