Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
U2af1Q9D883 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
U2af1Q9D883 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
U2af1Q9D883 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC18.16■□□□□ 0.5
U2af1Q9D883 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
U2af1Q9D883 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
U2af1Q9D883 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
U2af1Q9D883 Gm11524-201ENSMUST00000119349 807 ntBASIC18.16■□□□□ 0.5
U2af1Q9D883 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
U2af1Q9D883 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC18.16■□□□□ 0.5
U2af1Q9D883 AC159006.1-201ENSMUST00000226396 258 ntBASIC18.16■□□□□ 0.5
U2af1Q9D883 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
U2af1Q9D883 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
U2af1Q9D883 AC167013.2-201ENSMUST00000228520 2684 ntBASIC18.16■□□□□ 0.5
U2af1Q9D883 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
U2af1Q9D883 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
U2af1Q9D883 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
U2af1Q9D883 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
U2af1Q9D883 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
U2af1Q9D883 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
U2af1Q9D883 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
U2af1Q9D883 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
U2af1Q9D883 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
U2af1Q9D883 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
U2af1Q9D883 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC18.15■□□□□ 0.5
U2af1Q9D883 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
U2af1Q9D883 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC18.15■□□□□ 0.5
U2af1Q9D883 Gm15678-201ENSMUST00000117573 960 ntBASIC18.15■□□□□ 0.5
U2af1Q9D883 Gm14730-201ENSMUST00000122378 1045 ntBASIC18.15■□□□□ 0.5
U2af1Q9D883 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
U2af1Q9D883 Mir7654-201ENSMUST00000185082 70 ntBASIC18.15■□□□□ 0.5
U2af1Q9D883 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
U2af1Q9D883 Gm7498-201ENSMUST00000203282 1084 ntBASIC18.15■□□□□ 0.5
U2af1Q9D883 Gm18307-201ENSMUST00000206864 949 ntBASIC18.15■□□□□ 0.5
U2af1Q9D883 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC18.15■□□□□ 0.5
U2af1Q9D883 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
U2af1Q9D883 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
U2af1Q9D883 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
U2af1Q9D883 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
U2af1Q9D883 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC18.15■□□□□ 0.5
U2af1Q9D883 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
U2af1Q9D883 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
U2af1Q9D883 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC18.15■□□□□ 0.5
U2af1Q9D883 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
U2af1Q9D883 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
U2af1Q9D883 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
U2af1Q9D883 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
U2af1Q9D883 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC18.14■□□□□ 0.49
U2af1Q9D883 Gm26464-201ENSMUST00000157094 305 ntBASIC18.14■□□□□ 0.49
U2af1Q9D883 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
U2af1Q9D883 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
U2af1Q9D883 Gm45059-201ENSMUST00000205558 1077 ntBASIC18.14■□□□□ 0.49
U2af1Q9D883 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
U2af1Q9D883 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC18.14■□□□□ 0.49
U2af1Q9D883 Gm45384-201ENSMUST00000210451 277 ntBASIC18.14■□□□□ 0.49
U2af1Q9D883 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC18.14■□□□□ 0.49
U2af1Q9D883 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
U2af1Q9D883 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
U2af1Q9D883 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
U2af1Q9D883 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
U2af1Q9D883 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
U2af1Q9D883 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
U2af1Q9D883 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
U2af1Q9D883 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
U2af1Q9D883 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
U2af1Q9D883 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
U2af1Q9D883 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
U2af1Q9D883 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC18.14■□□□□ 0.49
U2af1Q9D883 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
U2af1Q9D883 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
U2af1Q9D883 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
U2af1Q9D883 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC18.14■□□□□ 0.49
U2af1Q9D883 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
U2af1Q9D883 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
U2af1Q9D883 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
U2af1Q9D883 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
U2af1Q9D883 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC18.13■□□□□ 0.49
U2af1Q9D883 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
U2af1Q9D883 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
U2af1Q9D883 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
U2af1Q9D883 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
U2af1Q9D883 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
U2af1Q9D883 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
U2af1Q9D883 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
U2af1Q9D883 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
U2af1Q9D883 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
U2af1Q9D883 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
U2af1Q9D883 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
U2af1Q9D883 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC18.13■□□□□ 0.49
U2af1Q9D883 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
U2af1Q9D883 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC18.13■□□□□ 0.49
U2af1Q9D883 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
U2af1Q9D883 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
U2af1Q9D883 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
U2af1Q9D883 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
U2af1Q9D883 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
U2af1Q9D883 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
U2af1Q9D883 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
U2af1Q9D883 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
U2af1Q9D883 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms