Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp5Q9D7S9 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp5Q9D7S9 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Chmp5Q9D7S9 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp5Q9D7S9 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp5Q9D7S9 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Chmp5Q9D7S9 Zkscan14-203ENSMUST00000198959 2243 ntBASIC17.29■□□□□ 0.36
Chmp5Q9D7S9 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp5Q9D7S9 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp5Q9D7S9 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp5Q9D7S9 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp5Q9D7S9 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp5Q9D7S9 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp5Q9D7S9 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp5Q9D7S9 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp5Q9D7S9 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC17.29■□□□□ 0.36
Chmp5Q9D7S9 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Chmp5Q9D7S9 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC17.29■□□□□ 0.36
Chmp5Q9D7S9 AA619741-201ENSMUST00000195095 646 ntBASIC17.29■□□□□ 0.36
Chmp5Q9D7S9 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.29■□□□□ 0.36
Chmp5Q9D7S9 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.29■□□□□ 0.36
Chmp5Q9D7S9 Mzt1-203ENSMUST00000227948 952 ntBASIC17.29■□□□□ 0.36
Chmp5Q9D7S9 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp5Q9D7S9 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp5Q9D7S9 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp5Q9D7S9 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp5Q9D7S9 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp5Q9D7S9 AC238940.1-201ENSMUST00000225106 1858 ntBASIC17.29■□□□□ 0.36
Chmp5Q9D7S9 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp5Q9D7S9 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.28■□□□□ 0.36
Chmp5Q9D7S9 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp5Q9D7S9 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp5Q9D7S9 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp5Q9D7S9 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp5Q9D7S9 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp5Q9D7S9 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp5Q9D7S9 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC17.28■□□□□ 0.36
Chmp5Q9D7S9 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp5Q9D7S9 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.28■□□□□ 0.36
Chmp5Q9D7S9 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.28■□□□□ 0.36
Chmp5Q9D7S9 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.28■□□□□ 0.36
Chmp5Q9D7S9 AA543401-201ENSMUST00000164248 1269 ntBASIC17.28■□□□□ 0.36
Chmp5Q9D7S9 Mir3113-201ENSMUST00000175478 76 ntBASIC17.28■□□□□ 0.36
Chmp5Q9D7S9 Gm38225-201ENSMUST00000194001 393 ntBASIC17.28■□□□□ 0.36
Chmp5Q9D7S9 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp5Q9D7S9 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp5Q9D7S9 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp5Q9D7S9 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp5Q9D7S9 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC17.28■□□□□ 0.36
Chmp5Q9D7S9 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp5Q9D7S9 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Chmp5Q9D7S9 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp5Q9D7S9 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp5Q9D7S9 Gm45751-201ENSMUST00000210185 1573 ntBASIC17.28■□□□□ 0.36
Chmp5Q9D7S9 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp5Q9D7S9 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp5Q9D7S9 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp5Q9D7S9 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp5Q9D7S9 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp5Q9D7S9 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp5Q9D7S9 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Chmp5Q9D7S9 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp5Q9D7S9 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC17.27■□□□□ 0.36
Chmp5Q9D7S9 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp5Q9D7S9 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp5Q9D7S9 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp5Q9D7S9 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp5Q9D7S9 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp5Q9D7S9 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp5Q9D7S9 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp5Q9D7S9 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Chmp5Q9D7S9 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.36
Chmp5Q9D7S9 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chmp5Q9D7S9 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chmp5Q9D7S9 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Chmp5Q9D7S9 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC17.27■□□□□ 0.35
Chmp5Q9D7S9 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chmp5Q9D7S9 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chmp5Q9D7S9 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chmp5Q9D7S9 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Chmp5Q9D7S9 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Chmp5Q9D7S9 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Chmp5Q9D7S9 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Chmp5Q9D7S9 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Chmp5Q9D7S9 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Chmp5Q9D7S9 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Chmp5Q9D7S9 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chmp5Q9D7S9 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chmp5Q9D7S9 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chmp5Q9D7S9 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp5Q9D7S9 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp5Q9D7S9 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.26■□□□□ 0.35
Chmp5Q9D7S9 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.26■□□□□ 0.35
Chmp5Q9D7S9 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp5Q9D7S9 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Chmp5Q9D7S9 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC17.26■□□□□ 0.35
Chmp5Q9D7S9 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Chmp5Q9D7S9 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC17.26■□□□□ 0.35
Chmp5Q9D7S9 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chmp5Q9D7S9 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms