Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3a3Q9D554 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3a3Q9D554 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3a3Q9D554 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sf3a3Q9D554 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3a3Q9D554 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Sf3a3Q9D554 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3a3Q9D554 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3a3Q9D554 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14□□□□□ -0.17
Sf3a3Q9D554 Gm4899-201ENSMUST00000178708 719 ntBASIC14□□□□□ -0.17
Sf3a3Q9D554 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC14□□□□□ -0.17
Sf3a3Q9D554 Gm37230-201ENSMUST00000194491 818 ntBASIC14□□□□□ -0.17
Sf3a3Q9D554 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sf3a3Q9D554 AC154595.3-201ENSMUST00000224579 384 ntBASIC14□□□□□ -0.17
Sf3a3Q9D554 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3a3Q9D554 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3a3Q9D554 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14□□□□□ -0.17
Sf3a3Q9D554 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3a3Q9D554 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3a3Q9D554 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3a3Q9D554 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sf3a3Q9D554 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sf3a3Q9D554 Gm45242-201ENSMUST00000210666 2129 ntBASIC14□□□□□ -0.17
Sf3a3Q9D554 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Sf3a3Q9D554 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Sf3a3Q9D554 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC14□□□□□ -0.17
Sf3a3Q9D554 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Sf3a3Q9D554 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3a3Q9D554 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3a3Q9D554 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.99□□□□□ -0.17
Sf3a3Q9D554 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3a3Q9D554 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3a3Q9D554 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3a3Q9D554 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3a3Q9D554 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3a3Q9D554 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3a3Q9D554 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.99□□□□□ -0.17
Sf3a3Q9D554 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3a3Q9D554 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Sf3a3Q9D554 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC13.99□□□□□ -0.17
Sf3a3Q9D554 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Sf3a3Q9D554 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.99□□□□□ -0.17
Sf3a3Q9D554 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3a3Q9D554 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.99□□□□□ -0.17
Sf3a3Q9D554 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3a3Q9D554 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3a3Q9D554 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3a3Q9D554 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Sf3a3Q9D554 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3a3Q9D554 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3a3Q9D554 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Sf3a3Q9D554 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3a3Q9D554 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Sf3a3Q9D554 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Sf3a3Q9D554 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3a3Q9D554 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3a3Q9D554 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.98□□□□□ -0.17
Sf3a3Q9D554 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3a3Q9D554 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3a3Q9D554 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3a3Q9D554 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Sf3a3Q9D554 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3a3Q9D554 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3a3Q9D554 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.98□□□□□ -0.17
Sf3a3Q9D554 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.98□□□□□ -0.17
Sf3a3Q9D554 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3a3Q9D554 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3a3Q9D554 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Sf3a3Q9D554 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3a3Q9D554 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3a3Q9D554 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3a3Q9D554 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3a3Q9D554 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
Sf3a3Q9D554 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3a3Q9D554 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
Sf3a3Q9D554 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.98□□□□□ -0.17
Sf3a3Q9D554 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.98□□□□□ -0.17
Sf3a3Q9D554 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3a3Q9D554 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3a3Q9D554 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3a3Q9D554 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3a3Q9D554 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3a3Q9D554 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3a3Q9D554 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Sf3a3Q9D554 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3a3Q9D554 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3a3Q9D554 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3a3Q9D554 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3a3Q9D554 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3a3Q9D554 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3a3Q9D554 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sf3a3Q9D554 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3a3Q9D554 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3a3Q9D554 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3a3Q9D554 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3a3Q9D554 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3a3Q9D554 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3a3Q9D554 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3a3Q9D554 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sf3a3Q9D554 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms