Protein–RNA interactions for Protein: Q9D4V4

Taf1d, TATA box-binding protein-associated factor RNA polymerase I subunit D, mousemouse

Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf1dQ9D4V4 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Taf1dQ9D4V4 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.37■□□□□ 0.21
Taf1dQ9D4V4 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Taf1dQ9D4V4 Gm10434-201ENSMUST00000101158 471 ntBASIC16.37■□□□□ 0.21
Taf1dQ9D4V4 Gm13886-201ENSMUST00000117876 1183 ntBASIC16.37■□□□□ 0.21
Taf1dQ9D4V4 Gm14208-201ENSMUST00000119645 678 ntBASIC16.37■□□□□ 0.21
Taf1dQ9D4V4 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC16.37■□□□□ 0.21
Taf1dQ9D4V4 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Taf1dQ9D4V4 Gm27023-201ENSMUST00000182372 285 ntBASIC16.37■□□□□ 0.21
Taf1dQ9D4V4 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Taf1dQ9D4V4 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC16.37■□□□□ 0.21
Taf1dQ9D4V4 Gm43378-201ENSMUST00000199336 582 ntBASIC16.37■□□□□ 0.21
Taf1dQ9D4V4 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC16.37■□□□□ 0.21
Taf1dQ9D4V4 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Taf1dQ9D4V4 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Taf1dQ9D4V4 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Taf1dQ9D4V4 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Taf1dQ9D4V4 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Taf1dQ9D4V4 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Taf1dQ9D4V4 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Taf1dQ9D4V4 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Taf1dQ9D4V4 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Taf1dQ9D4V4 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Taf1dQ9D4V4 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.37■□□□□ 0.21
Taf1dQ9D4V4 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Taf1dQ9D4V4 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Taf1dQ9D4V4 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Taf1dQ9D4V4 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Taf1dQ9D4V4 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC16.36■□□□□ 0.21
Taf1dQ9D4V4 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.36■□□□□ 0.21
Taf1dQ9D4V4 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Taf1dQ9D4V4 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Taf1dQ9D4V4 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Taf1dQ9D4V4 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Taf1dQ9D4V4 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Taf1dQ9D4V4 Gm9083-201ENSMUST00000120423 819 ntBASIC16.36■□□□□ 0.21
Taf1dQ9D4V4 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC16.36■□□□□ 0.21
Taf1dQ9D4V4 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC16.36■□□□□ 0.21
Taf1dQ9D4V4 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC16.36■□□□□ 0.21
Taf1dQ9D4V4 Mir1943-201ENSMUST00000158276 73 ntBASIC16.36■□□□□ 0.21
Taf1dQ9D4V4 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Taf1dQ9D4V4 Gm26956-201ENSMUST00000182176 986 ntBASIC16.36■□□□□ 0.21
Taf1dQ9D4V4 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Taf1dQ9D4V4 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Taf1dQ9D4V4 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC16.36■□□□□ 0.21
Taf1dQ9D4V4 AC131690.1-201ENSMUST00000218406 374 ntBASIC16.36■□□□□ 0.21
Taf1dQ9D4V4 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Taf1dQ9D4V4 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Taf1dQ9D4V4 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Taf1dQ9D4V4 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Taf1dQ9D4V4 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Taf1dQ9D4V4 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Taf1dQ9D4V4 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Taf1dQ9D4V4 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Taf1dQ9D4V4 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Taf1dQ9D4V4 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Taf1dQ9D4V4 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Taf1dQ9D4V4 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Taf1dQ9D4V4 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Taf1dQ9D4V4 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Taf1dQ9D4V4 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Taf1dQ9D4V4 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Taf1dQ9D4V4 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Taf1dQ9D4V4 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Taf1dQ9D4V4 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Taf1dQ9D4V4 AC139054.1-201ENSMUST00000226898 1598 ntBASIC16.35■□□□□ 0.21
Taf1dQ9D4V4 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.35■□□□□ 0.21
Taf1dQ9D4V4 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Taf1dQ9D4V4 Gm20632-201ENSMUST00000176760 2427 ntBASIC16.35■□□□□ 0.21
Taf1dQ9D4V4 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Taf1dQ9D4V4 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Taf1dQ9D4V4 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Taf1dQ9D4V4 Gm11637-201ENSMUST00000120601 592 ntBASIC16.35■□□□□ 0.21
Taf1dQ9D4V4 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC16.35■□□□□ 0.21
Taf1dQ9D4V4 Gm15276-201ENSMUST00000145953 498 ntBASIC16.35■□□□□ 0.21
Taf1dQ9D4V4 Gm20426-201ENSMUST00000173657 440 ntBASIC16.35■□□□□ 0.21
Taf1dQ9D4V4 Gm8546-201ENSMUST00000178288 1264 ntBASIC16.35■□□□□ 0.21
Taf1dQ9D4V4 Gm10109-202ENSMUST00000206890 1211 ntBASIC16.35■□□□□ 0.21
Taf1dQ9D4V4 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC16.35■□□□□ 0.21
Taf1dQ9D4V4 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Taf1dQ9D4V4 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Taf1dQ9D4V4 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Taf1dQ9D4V4 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Taf1dQ9D4V4 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.35■□□□□ 0.21
Taf1dQ9D4V4 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Taf1dQ9D4V4 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Taf1dQ9D4V4 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Taf1dQ9D4V4 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Taf1dQ9D4V4 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Taf1dQ9D4V4 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Taf1dQ9D4V4 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Taf1dQ9D4V4 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Taf1dQ9D4V4 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Taf1dQ9D4V4 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Taf1dQ9D4V4 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.34■□□□□ 0.21
Taf1dQ9D4V4 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Taf1dQ9D4V4 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Taf1dQ9D4V4 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Taf1dQ9D4V4 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Taf1dQ9D4V4 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms