Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trim42Q9D2H5 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim42Q9D2H5 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim42Q9D2H5 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Trim42Q9D2H5 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim42Q9D2H5 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim42Q9D2H5 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim42Q9D2H5 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim42Q9D2H5 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim42Q9D2H5 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim42Q9D2H5 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim42Q9D2H5 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim42Q9D2H5 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Trim42Q9D2H5 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Trim42Q9D2H5 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.85□□□□□ -0.19
Trim42Q9D2H5 Gm17971-201ENSMUST00000190239 806 ntBASIC13.85□□□□□ -0.19
Trim42Q9D2H5 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trim42Q9D2H5 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.85□□□□□ -0.19
Trim42Q9D2H5 Birc2-201ENSMUST00000054878 378 ntBASIC13.85□□□□□ -0.19
Trim42Q9D2H5 Rps4l-201ENSMUST00000071745 943 ntBASIC13.85□□□□□ -0.19
Trim42Q9D2H5 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim42Q9D2H5 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trim42Q9D2H5 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim42Q9D2H5 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim42Q9D2H5 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim42Q9D2H5 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.85□□□□□ -0.19
Trim42Q9D2H5 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Trim42Q9D2H5 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim42Q9D2H5 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim42Q9D2H5 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim42Q9D2H5 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.85□□□□□ -0.19
Trim42Q9D2H5 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim42Q9D2H5 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim42Q9D2H5 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trim42Q9D2H5 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim42Q9D2H5 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Gm18558-201ENSMUST00000186253 1214 ntBASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Gm43347-201ENSMUST00000200226 580 ntBASIC13.84□□□□□ -0.19
Trim42Q9D2H5 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim42Q9D2H5 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim42Q9D2H5 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trim42Q9D2H5 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim42Q9D2H5 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Trim42Q9D2H5 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.83□□□□□ -0.2
Trim42Q9D2H5 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim42Q9D2H5 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim42Q9D2H5 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim42Q9D2H5 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim42Q9D2H5 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim42Q9D2H5 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim42Q9D2H5 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim42Q9D2H5 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
Trim42Q9D2H5 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim42Q9D2H5 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.83□□□□□ -0.2
Trim42Q9D2H5 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.83□□□□□ -0.2
Trim42Q9D2H5 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.83□□□□□ -0.2
Trim42Q9D2H5 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.83□□□□□ -0.2
Trim42Q9D2H5 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim42Q9D2H5 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.83□□□□□ -0.2
Trim42Q9D2H5 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.83□□□□□ -0.2
Trim42Q9D2H5 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.83□□□□□ -0.2
Trim42Q9D2H5 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms