Protein–RNA interactions for Protein: Q9D0N8

Tmem88, Transmembrane protein 88, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88Q9D0N8 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Gm45706-201ENSMUST00000213063 2136 ntBASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tmem88Q9D0N8 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Gm15372-201ENSMUST00000120729 834 ntBASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 AC153889.1-201ENSMUST00000219257 330 ntBASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 AC124569.2-201ENSMUST00000225998 818 ntBASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Gm21009-201ENSMUST00000197169 1669 ntBASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tmem88Q9D0N8 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms