Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ndc80Q9D0F1 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.15
Ndc80Q9D0F1 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ndc80Q9D0F1 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ndc80Q9D0F1 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndc80Q9D0F1 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.08□□□□□ -0.16
Ndc80Q9D0F1 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndc80Q9D0F1 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndc80Q9D0F1 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndc80Q9D0F1 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndc80Q9D0F1 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndc80Q9D0F1 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndc80Q9D0F1 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndc80Q9D0F1 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.08□□□□□ -0.16
Ndc80Q9D0F1 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Ndc80Q9D0F1 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.08□□□□□ -0.16
Ndc80Q9D0F1 Gm12428-201ENSMUST00000119844 727 ntBASIC14.08□□□□□ -0.16
Ndc80Q9D0F1 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ndc80Q9D0F1 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.08□□□□□ -0.16
Ndc80Q9D0F1 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndc80Q9D0F1 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ndc80Q9D0F1 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.08□□□□□ -0.16
Ndc80Q9D0F1 Shd-206ENSMUST00000225145 998 ntBASIC14.08□□□□□ -0.16
Ndc80Q9D0F1 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.08□□□□□ -0.16
Ndc80Q9D0F1 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndc80Q9D0F1 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndc80Q9D0F1 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.08□□□□□ -0.16
Ndc80Q9D0F1 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.08□□□□□ -0.16
Ndc80Q9D0F1 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndc80Q9D0F1 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndc80Q9D0F1 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
Ndc80Q9D0F1 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndc80Q9D0F1 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndc80Q9D0F1 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndc80Q9D0F1 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndc80Q9D0F1 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ndc80Q9D0F1 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndc80Q9D0F1 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.08□□□□□ -0.16
Ndc80Q9D0F1 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Ndc80Q9D0F1 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ndc80Q9D0F1 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 Mir1897-201ENSMUST00000122581 272 ntBASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC14.07□□□□□ -0.16
Ndc80Q9D0F1 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ndc80Q9D0F1 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Ndc80Q9D0F1 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ndc80Q9D0F1 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ndc80Q9D0F1 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ndc80Q9D0F1 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.06□□□□□ -0.16
Ndc80Q9D0F1 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ndc80Q9D0F1 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ndc80Q9D0F1 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ndc80Q9D0F1 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ndc80Q9D0F1 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ndc80Q9D0F1 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.06□□□□□ -0.16
Ndc80Q9D0F1 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.06□□□□□ -0.16
Ndc80Q9D0F1 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ndc80Q9D0F1 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ndc80Q9D0F1 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.06□□□□□ -0.16
Ndc80Q9D0F1 Gm27618-201ENSMUST00000183671 60 ntBASIC14.06□□□□□ -0.16
Ndc80Q9D0F1 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.06□□□□□ -0.16
Ndc80Q9D0F1 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms