Protein–RNA interactions for Protein: Q9CYI0

Protein Njmu-R1, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CYI0 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Q9CYI0 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Q9CYI0 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Q9CYI0 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Q9CYI0 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Q9CYI0 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Q9CYI0 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15.29■□□□□ 0.04
Q9CYI0 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Q9CYI0 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Q9CYI0 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Q9CYI0 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Q9CYI0 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Q9CYI0 AC154527.2-201ENSMUST00000225256 1466 ntBASIC15.29■□□□□ 0.04
Q9CYI0 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Q9CYI0 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Q9CYI0 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Q9CYI0 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Q9CYI0 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Q9CYI0 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Q9CYI0 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC15.29■□□□□ 0.04
Q9CYI0 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Q9CYI0 AC166997.1-201ENSMUST00000225122 572 ntBASIC15.29■□□□□ 0.04
Q9CYI0 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Q9CYI0 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Q9CYI0 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Q9CYI0 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Q9CYI0 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Q9CYI0 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Q9CYI0 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Q9CYI0 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Q9CYI0 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Q9CYI0 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Q9CYI0 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC15.29■□□□□ 0.04
Q9CYI0 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q9CYI0 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.28■□□□□ 0.04
Q9CYI0 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q9CYI0 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q9CYI0 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q9CYI0 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q9CYI0 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q9CYI0 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q9CYI0 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Q9CYI0 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC15.28■□□□□ 0.04
Q9CYI0 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Q9CYI0 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Q9CYI0 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC15.28■□□□□ 0.04
Q9CYI0 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q9CYI0 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC15.28■□□□□ 0.04
Q9CYI0 Gm43438-201ENSMUST00000198133 379 ntBASIC15.28■□□□□ 0.04
Q9CYI0 Gm18905-201ENSMUST00000205454 928 ntBASIC15.28■□□□□ 0.04
Q9CYI0 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Q9CYI0 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q9CYI0 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q9CYI0 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q9CYI0 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q9CYI0 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Q9CYI0 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Q9CYI0 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Q9CYI0 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.28■□□□□ 0.04
Q9CYI0 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Q9CYI0 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC15.28■□□□□ 0.04
Q9CYI0 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Q9CYI0 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Q9CYI0 Gm5422-201ENSMUST00000050717 2721 ntBASIC15.28■□□□□ 0.04
Q9CYI0 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Q9CYI0 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Q9CYI0 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Q9CYI0 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Q9CYI0 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Q9CYI0 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Q9CYI0 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Q9CYI0 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Q9CYI0 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Q9CYI0 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Q9CYI0 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Q9CYI0 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Q9CYI0 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Q9CYI0 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Q9CYI0 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Q9CYI0 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Q9CYI0 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
Q9CYI0 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Q9CYI0 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Q9CYI0 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC15.27■□□□□ 0.04
Q9CYI0 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC15.27■□□□□ 0.04
Q9CYI0 Gm24420-201ENSMUST00000176676 59 ntBASIC15.27■□□□□ 0.04
Q9CYI0 Gm28911-201ENSMUST00000188837 117 ntBASIC15.27■□□□□ 0.04
Q9CYI0 AC159006.1-201ENSMUST00000226396 258 ntBASIC15.27■□□□□ 0.04
Q9CYI0 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Q9CYI0 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Q9CYI0 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Q9CYI0 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Q9CYI0 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Q9CYI0 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Q9CYI0 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Q9CYI0 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Q9CYI0 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Q9CYI0 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Q9CYI0 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Q9CYI0 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms