Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.74□□□□□ -0.21
Ssu72Q9CY97 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ssu72Q9CY97 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Ssu72Q9CY97 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ssu72Q9CY97 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Ssu72Q9CY97 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ssu72Q9CY97 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ssu72Q9CY97 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Ssu72Q9CY97 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ssu72Q9CY97 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Ssu72Q9CY97 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Ssu72Q9CY97 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ssu72Q9CY97 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.73□□□□□ -0.21
Ssu72Q9CY97 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssu72Q9CY97 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssu72Q9CY97 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssu72Q9CY97 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssu72Q9CY97 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Ssu72Q9CY97 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssu72Q9CY97 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssu72Q9CY97 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssu72Q9CY97 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssu72Q9CY97 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Ssu72Q9CY97 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ssu72Q9CY97 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssu72Q9CY97 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.73□□□□□ -0.21
Ssu72Q9CY97 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Ssu72Q9CY97 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.73□□□□□ -0.21
Ssu72Q9CY97 Gm6222-201ENSMUST00000120787 396 ntBASIC13.73□□□□□ -0.21
Ssu72Q9CY97 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ssu72Q9CY97 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.73□□□□□ -0.21
Ssu72Q9CY97 Gm37714-201ENSMUST00000194742 342 ntBASIC13.73□□□□□ -0.21
Ssu72Q9CY97 Gm44492-201ENSMUST00000197012 141 ntBASIC13.73□□□□□ -0.21
Ssu72Q9CY97 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.73□□□□□ -0.21
Ssu72Q9CY97 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssu72Q9CY97 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssu72Q9CY97 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssu72Q9CY97 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssu72Q9CY97 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssu72Q9CY97 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.73□□□□□ -0.21
Ssu72Q9CY97 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Ssu72Q9CY97 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssu72Q9CY97 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ssu72Q9CY97 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Ssu72Q9CY97 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssu72Q9CY97 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Ssu72Q9CY97 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Ssu72Q9CY97 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ssu72Q9CY97 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ssu72Q9CY97 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ssu72Q9CY97 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ssu72Q9CY97 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ssu72Q9CY97 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ssu72Q9CY97 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.72□□□□□ -0.21
Ssu72Q9CY97 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Ssu72Q9CY97 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ssu72Q9CY97 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ssu72Q9CY97 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ssu72Q9CY97 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Ssu72Q9CY97 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ssu72Q9CY97 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ssu72Q9CY97 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Ssu72Q9CY97 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ssu72Q9CY97 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ssu72Q9CY97 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Ssu72Q9CY97 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.72□□□□□ -0.21
Ssu72Q9CY97 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ssu72Q9CY97 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Ssu72Q9CY97 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ssu72Q9CY97 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ssu72Q9CY97 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.72□□□□□ -0.21
Ssu72Q9CY97 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ssu72Q9CY97 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.72□□□□□ -0.21
Ssu72Q9CY97 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.72□□□□□ -0.21
Ssu72Q9CY97 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ssu72Q9CY97 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Ssu72Q9CY97 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ssu72Q9CY97 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ssu72Q9CY97 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ssu72Q9CY97 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ssu72Q9CY97 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Ssu72Q9CY97 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ssu72Q9CY97 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ssu72Q9CY97 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ssu72Q9CY97 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.72□□□□□ -0.21
Ssu72Q9CY97 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ssu72Q9CY97 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ssu72Q9CY97 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ssu72Q9CY97 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ssu72Q9CY97 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ssu72Q9CY97 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ssu72Q9CY97 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ssu72Q9CY97 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.71□□□□□ -0.21
Ssu72Q9CY97 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ssu72Q9CY97 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Ssu72Q9CY97 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ssu72Q9CY97 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ssu72Q9CY97 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.71□□□□□ -0.21
Ssu72Q9CY97 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Ssu72Q9CY97 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms