Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx47Q9CWX9 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx47Q9CWX9 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx47Q9CWX9 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx47Q9CWX9 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ddx47Q9CWX9 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx47Q9CWX9 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx47Q9CWX9 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx47Q9CWX9 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.22□□□□□ -0.13
Ddx47Q9CWX9 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.22□□□□□ -0.13
Ddx47Q9CWX9 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.22□□□□□ -0.13
Ddx47Q9CWX9 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx47Q9CWX9 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.22□□□□□ -0.13
Ddx47Q9CWX9 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.22□□□□□ -0.13
Ddx47Q9CWX9 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx47Q9CWX9 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx47Q9CWX9 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx47Q9CWX9 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx47Q9CWX9 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ddx47Q9CWX9 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx47Q9CWX9 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx47Q9CWX9 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx47Q9CWX9 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx47Q9CWX9 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx47Q9CWX9 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx47Q9CWX9 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx47Q9CWX9 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx47Q9CWX9 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx47Q9CWX9 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx47Q9CWX9 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx47Q9CWX9 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Ddx47Q9CWX9 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.21□□□□□ -0.13
Ddx47Q9CWX9 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx47Q9CWX9 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx47Q9CWX9 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx47Q9CWX9 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx47Q9CWX9 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ddx47Q9CWX9 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx47Q9CWX9 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx47Q9CWX9 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx47Q9CWX9 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ddx47Q9CWX9 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ddx47Q9CWX9 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ddx47Q9CWX9 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ddx47Q9CWX9 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.21□□□□□ -0.14
Ddx47Q9CWX9 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ddx47Q9CWX9 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ddx47Q9CWX9 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ddx47Q9CWX9 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx47Q9CWX9 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ddx47Q9CWX9 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx47Q9CWX9 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx47Q9CWX9 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx47Q9CWX9 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx47Q9CWX9 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx47Q9CWX9 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx47Q9CWX9 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.2□□□□□ -0.14
Ddx47Q9CWX9 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx47Q9CWX9 Gm13036-201ENSMUST00000117799 748 ntBASIC14.2□□□□□ -0.14
Ddx47Q9CWX9 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.2□□□□□ -0.14
Ddx47Q9CWX9 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx47Q9CWX9 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx47Q9CWX9 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.2□□□□□ -0.14
Ddx47Q9CWX9 Gm44608-201ENSMUST00000206827 855 ntBASIC14.2□□□□□ -0.14
Ddx47Q9CWX9 Thap2-203ENSMUST00000218989 527 ntBASIC14.2□□□□□ -0.14
Ddx47Q9CWX9 Rps4l-201ENSMUST00000071745 943 ntBASIC14.2□□□□□ -0.14
Ddx47Q9CWX9 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ddx47Q9CWX9 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx47Q9CWX9 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx47Q9CWX9 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx47Q9CWX9 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Ddx47Q9CWX9 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx47Q9CWX9 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.2□□□□□ -0.14
Ddx47Q9CWX9 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx47Q9CWX9 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx47Q9CWX9 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ddx47Q9CWX9 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx47Q9CWX9 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx47Q9CWX9 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ddx47Q9CWX9 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx47Q9CWX9 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx47Q9CWX9 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx47Q9CWX9 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.19□□□□□ -0.14
Ddx47Q9CWX9 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx47Q9CWX9 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx47Q9CWX9 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.19□□□□□ -0.14
Ddx47Q9CWX9 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ddx47Q9CWX9 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx47Q9CWX9 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx47Q9CWX9 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx47Q9CWX9 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx47Q9CWX9 Gm9385-201ENSMUST00000117563 472 ntBASIC14.19□□□□□ -0.14
Ddx47Q9CWX9 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ddx47Q9CWX9 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.19□□□□□ -0.14
Ddx47Q9CWX9 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx47Q9CWX9 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.19□□□□□ -0.14
Ddx47Q9CWX9 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ddx47Q9CWX9 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Ddx47Q9CWX9 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ddx47Q9CWX9 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms