Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf135Q9CWS1 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf135Q9CWS1 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Rnf135Q9CWS1 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf135Q9CWS1 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf135Q9CWS1 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.42□□□□□ -0.1
Rnf135Q9CWS1 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf135Q9CWS1 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.42□□□□□ -0.1
Rnf135Q9CWS1 Gm27631-201ENSMUST00000184163 466 ntBASIC14.42□□□□□ -0.1
Rnf135Q9CWS1 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf135Q9CWS1 AA619741-201ENSMUST00000195095 646 ntBASIC14.42□□□□□ -0.1
Rnf135Q9CWS1 Gm18049-201ENSMUST00000208909 581 ntBASIC14.42□□□□□ -0.1
Rnf135Q9CWS1 Gm45453-201ENSMUST00000211758 853 ntBASIC14.42□□□□□ -0.1
Rnf135Q9CWS1 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.42□□□□□ -0.1
Rnf135Q9CWS1 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf135Q9CWS1 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf135Q9CWS1 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
Rnf135Q9CWS1 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf135Q9CWS1 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Rnf135Q9CWS1 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.42□□□□□ -0.1
Rnf135Q9CWS1 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Rnf135Q9CWS1 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.42□□□□□ -0.1
Rnf135Q9CWS1 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf135Q9CWS1 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf135Q9CWS1 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.42□□□□□ -0.1
Rnf135Q9CWS1 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf135Q9CWS1 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.42□□□□□ -0.1
Rnf135Q9CWS1 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf135Q9CWS1 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rnf135Q9CWS1 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 Gm5866-201ENSMUST00000177881 973 ntBASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 Gm2445-201ENSMUST00000182798 989 ntBASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rnf135Q9CWS1 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf135Q9CWS1 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Rnf135Q9CWS1 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf135Q9CWS1 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf135Q9CWS1 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf135Q9CWS1 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf135Q9CWS1 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf135Q9CWS1 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf135Q9CWS1 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf135Q9CWS1 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf135Q9CWS1 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.4□□□□□ -0.1
Rnf135Q9CWS1 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Rnf135Q9CWS1 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.4□□□□□ -0.1
Rnf135Q9CWS1 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.4□□□□□ -0.1
Rnf135Q9CWS1 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf135Q9CWS1 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rnf135Q9CWS1 Gm29541-201ENSMUST00000191351 678 ntBASIC14.4□□□□□ -0.1
Rnf135Q9CWS1 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.4□□□□□ -0.1
Rnf135Q9CWS1 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf135Q9CWS1 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.4□□□□□ -0.1
Rnf135Q9CWS1 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.4□□□□□ -0.1
Rnf135Q9CWS1 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf135Q9CWS1 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf135Q9CWS1 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Rnf135Q9CWS1 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf135Q9CWS1 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rnf135Q9CWS1 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Rnf135Q9CWS1 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Rnf135Q9CWS1 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.4□□□□□ -0.1
Rnf135Q9CWS1 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 99.2 ms