Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Smc3Q9CW03 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smc3Q9CW03 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc3Q9CW03 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Smc3Q9CW03 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc3Q9CW03 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc3Q9CW03 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc3Q9CW03 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Smc3Q9CW03 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smc3Q9CW03 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc3Q9CW03 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc3Q9CW03 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC16.26■□□□□ 0.19
Smc3Q9CW03 Gm6443-201ENSMUST00000203599 874 ntBASIC16.26■□□□□ 0.19
Smc3Q9CW03 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.26■□□□□ 0.19
Smc3Q9CW03 AC154595.3-201ENSMUST00000224579 384 ntBASIC16.26■□□□□ 0.19
Smc3Q9CW03 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smc3Q9CW03 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Smc3Q9CW03 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc3Q9CW03 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc3Q9CW03 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Smc3Q9CW03 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc3Q9CW03 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc3Q9CW03 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smc3Q9CW03 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smc3Q9CW03 Gm38346-201ENSMUST00000192379 2639 ntBASIC16.26■□□□□ 0.19
Smc3Q9CW03 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc3Q9CW03 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc3Q9CW03 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc3Q9CW03 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Smc3Q9CW03 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc3Q9CW03 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc3Q9CW03 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smc3Q9CW03 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc3Q9CW03 Gm10729-202ENSMUST00000193403 1375 ntBASIC16.26■□□□□ 0.19
Smc3Q9CW03 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc3Q9CW03 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smc3Q9CW03 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smc3Q9CW03 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC16.25■□□□□ 0.19
Smc3Q9CW03 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smc3Q9CW03 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smc3Q9CW03 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smc3Q9CW03 Gm45667-201ENSMUST00000210380 1316 ntBASIC16.25■□□□□ 0.19
Smc3Q9CW03 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smc3Q9CW03 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smc3Q9CW03 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Smc3Q9CW03 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smc3Q9CW03 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smc3Q9CW03 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smc3Q9CW03 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smc3Q9CW03 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Smc3Q9CW03 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smc3Q9CW03 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Smc3Q9CW03 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smc3Q9CW03 Gm5566-201ENSMUST00000116118 459 ntBASIC16.25■□□□□ 0.19
Smc3Q9CW03 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC16.25■□□□□ 0.19
Smc3Q9CW03 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smc3Q9CW03 Gm9719-201ENSMUST00000162765 543 ntBASIC16.25■□□□□ 0.19
Smc3Q9CW03 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smc3Q9CW03 Gm29541-201ENSMUST00000191351 678 ntBASIC16.25■□□□□ 0.19
Smc3Q9CW03 Gm37714-201ENSMUST00000194742 342 ntBASIC16.25■□□□□ 0.19
Smc3Q9CW03 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Smc3Q9CW03 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC16.25■□□□□ 0.19
Smc3Q9CW03 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smc3Q9CW03 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Smc3Q9CW03 Zkscan14-203ENSMUST00000198959 2243 ntBASIC16.25■□□□□ 0.19
Smc3Q9CW03 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc3Q9CW03 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc3Q9CW03 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc3Q9CW03 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Smc3Q9CW03 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc3Q9CW03 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc3Q9CW03 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc3Q9CW03 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Smc3Q9CW03 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Smc3Q9CW03 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Smc3Q9CW03 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc3Q9CW03 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.24■□□□□ 0.19
Smc3Q9CW03 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.24■□□□□ 0.19
Smc3Q9CW03 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc3Q9CW03 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Smc3Q9CW03 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc3Q9CW03 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smc3Q9CW03 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smc3Q9CW03 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
Smc3Q9CW03 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC16.23■□□□□ 0.19
Smc3Q9CW03 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smc3Q9CW03 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc3Q9CW03 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc3Q9CW03 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc3Q9CW03 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.23■□□□□ 0.19
Smc3Q9CW03 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.23■□□□□ 0.19
Smc3Q9CW03 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Smc3Q9CW03 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc3Q9CW03 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.23■□□□□ 0.19
Smc3Q9CW03 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC16.23■□□□□ 0.19
Smc3Q9CW03 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc3Q9CW03 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smc3Q9CW03 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.23■□□□□ 0.19
Smc3Q9CW03 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smc3Q9CW03 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms